-public class JalviewUserColours implements java.io.Serializable {\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _schemeName.\r
- */\r
- private java.lang.String _schemeName;\r
-\r
- /**\r
- * Field _colourList.\r
- */\r
- private java.util.Vector _colourList;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public JalviewUserColours() {\r
- super();\r
- this._colourList = new java.util.Vector();\r
- }\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * \r
- * \r
- * @param vColour\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- */\r
- public void addColour(\r
- final Colour vColour)\r
- throws java.lang.IndexOutOfBoundsException {\r
- this._colourList.addElement(vColour);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vColour\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- */\r
- public void addColour(\r
- final int index,\r
- final Colour vColour)\r
- throws java.lang.IndexOutOfBoundsException {\r
- this._colourList.add(index, vColour);\r
- }\r
-\r
- /**\r
- * Method enumerateColour.\r
- * \r
- * @return an Enumeration over all Colour elements\r
- */\r
- public java.util.Enumeration enumerateColour(\r
- ) {\r
- return this._colourList.elements();\r
- }\r
-\r
- /**\r
- * Method getColour.\r
- * \r
- * @param index\r
- * @throws java.lang.IndexOutOfBoundsException if the index\r
- * given is outside the bounds of the collection\r
- * @return the value of the Colour at the given index\r
- */\r
- public Colour getColour(\r
- final int index)\r
- throws java.lang.IndexOutOfBoundsException {\r
- // check bounds for index\r
- if (index < 0 || index >= this._colourList.size()) {\r
- throw new IndexOutOfBoundsException("getColour: Index value '" + index + "' not in range [0.." + (this._colourList.size() - 1) + "]");\r
- }\r
- \r
- return (Colour) _colourList.get(index);\r
- }\r
-\r
- /**\r
- * Method getColour.Returns the contents of the collection in\r
- * an Array. <p>Note: Just in case the collection contents\r
- * are changing in another thread, we pass a 0-length Array of\r
- * the correct type into the API call. This way we <i>know</i>\r
- * that the Array returned is of exactly the correct length.\r
- * \r
- * @return this collection as an Array\r
- */\r
- public Colour[] getColour(\r
- ) {\r
- Colour[] array = new Colour[0];\r
- return (Colour[]) this._colourList.toArray(array);\r
- }\r
-\r
- /**\r
- * Method getColourCount.\r
- * \r
- * @return the size of this collection\r
- */\r
- public int getColourCount(\r
- ) {\r
- return this._colourList.size();\r
- }\r
-\r
- /**\r
- * Returns the value of field 'schemeName'.\r
- * \r
- * @return the value of field 'SchemeName'.\r
- */\r
- public java.lang.String getSchemeName(\r
- ) {\r
- return this._schemeName;\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid(\r
- ) {\r
- try {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- */\r
- public void marshal(\r
- final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException if an IOException occurs during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- */\r
- public void marshal(\r
- final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, handler);\r
+public class JalviewUserColours implements java.io.Serializable\r
+{\r
+\r
+ // --------------------------/\r
+ // - Class/Member Variables -/\r
+ // --------------------------/\r
+\r
+ /**\r
+ * Field _schemeName.\r
+ */\r
+ private java.lang.String _schemeName;\r
+\r
+ /**\r
+ * Field _colourList.\r
+ */\r
+ private java.util.Vector _colourList;\r
+\r
+ // ----------------/\r
+ // - Constructors -/\r
+ // ----------------/\r
+\r
+ public JalviewUserColours()\r
+ {\r
+ super();\r
+ this._colourList = new java.util.Vector();\r
+ }\r
+\r
+ // -----------/\r
+ // - Methods -/\r
+ // -----------/\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vColour\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addColour(final Colour vColour)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._colourList.addElement(vColour);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vColour\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addColour(final int index, final Colour vColour)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._colourList.add(index, vColour);\r
+ }\r
+\r
+ /**\r
+ * Method enumerateColour.\r
+ * \r
+ * @return an Enumeration over all Colour elements\r
+ */\r
+ public java.util.Enumeration enumerateColour()\r
+ {\r
+ return this._colourList.elements();\r
+ }\r
+\r
+ /**\r
+ * Method getColour.\r
+ * \r
+ * @param index\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ * @return the value of the Colour at the given index\r
+ */\r
+ public Colour getColour(final int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._colourList.size())\r
+ {\r
+ throw new IndexOutOfBoundsException("getColour: Index value '"\r
+ + index + "' not in range [0.."\r
+ + (this._colourList.size() - 1) + "]");\r