-public class Pdbentry implements java.io.Serializable {\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _id\r
- */\r
- private java.lang.String _id;\r
-\r
- /**\r
- * Field _type\r
- */\r
- private java.lang.String _type;\r
-\r
- /**\r
- * Field _file\r
- */\r
- private java.lang.String _file;\r
-\r
- /**\r
- * Field _items\r
- */\r
- private java.util.Vector _items;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public Pdbentry() {\r
- super();\r
- _items = new Vector();\r
- } //-- jalview.schemabinding.version2.Pdbentry()\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * Method addPdbentryItem\r
- * \r
- * \r
- * \r
- * @param vPdbentryItem\r
- */\r
- public void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _items.addElement(vPdbentryItem);\r
- } //-- void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem) \r
-\r
- /**\r
- * Method addPdbentryItem\r
- * \r
- * \r
- * \r
- * @param index\r
- * @param vPdbentryItem\r
- */\r
- public void addPdbentryItem(int index, jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _items.insertElementAt(vPdbentryItem, index);\r
- } //-- void addPdbentryItem(int, jalview.schemabinding.version2.PdbentryItem) \r
-\r
- /**\r
- * Method enumeratePdbentryItem\r
- * \r
- * \r
- * \r
- * @return Enumeration\r
- */\r
- public java.util.Enumeration enumeratePdbentryItem()\r
- {\r
- return _items.elements();\r
- } //-- java.util.Enumeration enumeratePdbentryItem() \r
-\r
- /**\r
- * Returns the value of field 'file'.\r
- * \r
- * @return String\r
- * @return the value of field 'file'.\r
- */\r
- public java.lang.String getFile()\r
- {\r
- return this._file;\r
- } //-- java.lang.String getFile() \r
-\r
- /**\r
- * Returns the value of field 'id'.\r
- * \r
- * @return String\r
- * @return the value of field 'id'.\r
- */\r
- public java.lang.String getId()\r
- {\r
- return this._id;\r
- } //-- java.lang.String getId() \r
-\r
- /**\r
- * Method getPdbentryItem\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return PdbentryItem\r
- */\r
- public jalview.schemabinding.version2.PdbentryItem getPdbentryItem(int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _items.size())) {\r
- throw new IndexOutOfBoundsException();\r
- }\r
- \r
- return (jalview.schemabinding.version2.PdbentryItem) _items.elementAt(index);\r
- } //-- jalview.schemabinding.version2.PdbentryItem getPdbentryItem(int) \r
-\r
- /**\r
- * Method getPdbentryItem\r
- * \r
- * \r
- * \r
- * @return PdbentryItem\r
- */\r
- public jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem()\r
- {\r
- int size = _items.size();\r
- jalview.schemabinding.version2.PdbentryItem[] mArray = new jalview.schemabinding.version2.PdbentryItem[size];\r
- for (int index = 0; index < size; index++) {\r
- mArray[index] = (jalview.schemabinding.version2.PdbentryItem) _items.elementAt(index);\r
- }\r
- return mArray;\r
- } //-- jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem() \r
-\r
- /**\r
- * Method getPdbentryItemCount\r
- * \r
- * \r
- * \r
- * @return int\r
- */\r
- public int getPdbentryItemCount()\r
- {\r
- return _items.size();\r
- } //-- int getPdbentryItemCount() \r
-\r
- /**\r
- * Returns the value of field 'type'.\r
- * \r
- * @return String\r
- * @return the value of field 'type'.\r
- */\r
- public java.lang.String getType()\r
- {\r
- return this._type;\r
- } //-- java.lang.String getType() \r
-\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Method removeAllPdbentryItem\r
- * \r
- */\r
- public void removeAllPdbentryItem()\r
- {\r
- _items.removeAllElements();\r
- } //-- void removeAllPdbentryItem() \r
-\r
- /**\r
- * Method removePdbentryItem\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return PdbentryItem\r
- */\r
- public jalview.schemabinding.version2.PdbentryItem removePdbentryItem(int index)\r
- {\r
- java.lang.Object obj = _items.elementAt(index);\r
- _items.removeElementAt(index);\r
- return (jalview.schemabinding.version2.PdbentryItem) obj;\r
- } //-- jalview.schemabinding.version2.PdbentryItem removePdbentryItem(int) \r
-\r
- /**\r
- * Sets the value of field 'file'.\r
- * \r
- * @param file the value of field 'file'.\r
- */\r
- public void setFile(java.lang.String file)\r
- {\r
- this._file = file;\r
- } //-- void setFile(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'id'.\r
- * \r
- * @param id the value of field 'id'.\r
- */\r
- public void setId(java.lang.String id)\r
+public class Pdbentry\r
+ implements java.io.Serializable\r
+{\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _id\r
+ */\r
+ private java.lang.String _id;\r
+\r
+ /**\r
+ * Field _type\r
+ */\r
+ private java.lang.String _type;\r
+\r
+ /**\r
+ * Field _file\r
+ */\r
+ private java.lang.String _file;\r
+\r
+ /**\r
+ * Field _items\r
+ */\r
+ private java.util.Vector _items;\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public Pdbentry()\r
+ {\r
+ super();\r
+ _items = new Vector();\r
+ } //-- jalview.schemabinding.version2.Pdbentry()\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ * Method addPdbentryItem\r
+ *\r
+ *\r
+ *\r
+ * @param vPdbentryItem\r
+ */\r
+ public void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem\r
+ vPdbentryItem)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _items.addElement(vPdbentryItem);\r
+ } //-- void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem)\r
+\r
+ /**\r
+ * Method addPdbentryItem\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @param vPdbentryItem\r
+ */\r
+ public void addPdbentryItem(int index,\r
+ jalview.schemabinding.version2.PdbentryItem\r
+ vPdbentryItem)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _items.insertElementAt(vPdbentryItem, index);\r
+ } //-- void addPdbentryItem(int, jalview.schemabinding.version2.PdbentryItem)\r
+\r
+ /**\r
+ * Method enumeratePdbentryItem\r
+ *\r
+ *\r
+ *\r
+ * @return Enumeration\r
+ */\r
+ public java.util.Enumeration enumeratePdbentryItem()\r
+ {\r
+ return _items.elements();\r
+ } //-- java.util.Enumeration enumeratePdbentryItem()\r
+\r
+ /**\r
+ * Returns the value of field 'file'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'file'.\r
+ */\r
+ public java.lang.String getFile()\r
+ {\r
+ return this._file;\r
+ } //-- java.lang.String getFile()\r
+\r
+ /**\r
+ * Returns the value of field 'id'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'id'.\r
+ */\r
+ public java.lang.String getId()\r
+ {\r
+ return this._id;\r
+ } //-- java.lang.String getId()\r
+\r
+ /**\r
+ * Method getPdbentryItem\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @return PdbentryItem\r
+ */\r
+ public jalview.schemabinding.version2.PdbentryItem getPdbentryItem(int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ //-- check bounds for index\r
+ if ( (index < 0) || (index > _items.size()))\r