+ public void setConsensus(java.util.Vector v);\r
+\r
+ public void setConservation(jalview.analysis.Conservation c);\r
+\r
+ public boolean conservationApplied();\r
+\r
+ public void setConservationInc(int i);\r
+\r
+ public int getConservationInc();\r
+\r
+ public int getThreshold();\r
+\r
+ public void setThreshold(int ct, boolean ignoreGaps);\r
+\r
+\r