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JAL-2371 slight simplification of findColour overrides
[jalview.git]
/
src
/
jalview
/
schemes
/
PIDColourScheme.java
diff --git
a/src/jalview/schemes/PIDColourScheme.java
b/src/jalview/schemes/PIDColourScheme.java
index
a6301fa
..
6ca1393
100755
(executable)
--- a/
src/jalview/schemes/PIDColourScheme.java
+++ b/
src/jalview/schemes/PIDColourScheme.java
@@
-57,7
+57,7
@@
public class PIDColourScheme extends ResidueColourScheme
c -= ('a' - 'A');
}
c -= ('a' - 'A');
}
- if (consensusResidue == null)
+ if (consensusResidue == null || Comparison.isGap(c))
{
return Color.white;
}
{
return Color.white;
}
@@
-71,15
+71,12
@@
public class PIDColourScheme extends ResidueColourScheme
String.valueOf(c));
if (matchesConsensus)
{
String.valueOf(c));
if (matchesConsensus)
{
- if (!Comparison.isGap(c))
+ for (int i = 0; i < thresholds.length; i++)
{
{
- for (int i = 0; i < thresholds.length; i++)
+ if (pid > thresholds[i])
{
{
- if (pid > thresholds[i])
- {
- colour = pidColours[i];
- break;
- }
+ colour = pidColours[i];
+ break;
}
}
}
}
}
}