- if ( (Integer.parseInt(consensus[j].get("maxCount").toString()) != -1) &&\r
- consensus[j].contains(s))\r
- {\r
- sc = ( (Float) consensus[j].get(ignoreGaps)).floatValue();\r
+ if ( (Integer.parseInt(consensus[j].get(AAFrequency.MAXCOUNT).toString()) !=\r
+ -1) &&\r
+ consensus[j].contains(String.valueOf(c)))\r
+ {\r
+ sc = ( (Float) consensus[j].get(ignoreGaps)).floatValue();\r