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Merge branch 'develop' into features/JAL-653_JAL-1766_htslib_refseqsupport
[jalview.git]
/
src
/
jalview
/
schemes
/
RNAHelicesColourChooser.java
diff --git
a/src/jalview/schemes/RNAHelicesColourChooser.java
b/src/jalview/schemes/RNAHelicesColourChooser.java
index
05cffc2
..
1a13bbe
100644
(file)
--- a/
src/jalview/schemes/RNAHelicesColourChooser.java
+++ b/
src/jalview/schemes/RNAHelicesColourChooser.java
@@
-109,21
+109,7
@@
public class RNAHelicesColourChooser
av.setGlobalColourScheme(rhc);
av.setGlobalColourScheme(rhc);
- if (av.getAlignment().getGroups() != null)
- {
- for (SequenceGroup sg : ap.getAlignment().getGroups())
- {
- if (sg.cs == null)
- {
- continue;
- }
-
- sg.cs = new RNAHelicesColour(sg);
-
- }
- }
-
- ap.paintAlignment(false);
+ ap.paintAlignment(true);
}
void reset()
}
void reset()