- * Data bean class to simplify parameterisation in superposeStructures
- */
- public class SuperposeData
- {
- public String filename;
-
- public String pdbId;
-
- public String chain = "";
-
- public boolean isRna;
-
- /*
- * The pdb residue number (if any) mapped to columns of the alignment
- */
- public int[] pdbResNo; // or use SparseIntArray?
-
- public int modelNo;
-
- /**
- * Constructor
- *
- * @param width
- * width of alignment (number of columns that may potentially
- * participate in superposition)
- * @param model
- * structure viewer model number
- */
- public SuperposeData(int width, int model)
- {
- pdbResNo = new int[width];
- modelNo = model;
- }
- }
-
- /**