siftsMapping = getStructureMapping(seq, pdbFile, targetChainId,
pdb, maxChain, sqmpping, maxAlignseq);
seqToStrucMapping.add(siftsMapping);
siftsMapping = getStructureMapping(seq, pdbFile, targetChainId,
pdb, maxChain, sqmpping, maxAlignseq);
seqToStrucMapping.add(siftsMapping);