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Merge branch 'develop' into feature/JAL-3390hideUnmappedStructure
[jalview.git]
/
src
/
jalview
/
structures
/
models
/
AAStructureBindingModel.java
diff --git
a/src/jalview/structures/models/AAStructureBindingModel.java
b/src/jalview/structures/models/AAStructureBindingModel.java
index
8eea16f
..
47e7f30
100644
(file)
--- a/
src/jalview/structures/models/AAStructureBindingModel.java
+++ b/
src/jalview/structures/models/AAStructureBindingModel.java
@@
-1072,7
+1072,7
@@
public abstract class AAStructureBindingModel
* @param viewPanel
* @return
*/
* @param viewPanel
* @return
*/
- protected Map<Object, AtomSpecModel> buildColoursMap(
+ public Map<Object, AtomSpecModel> buildColoursMap(
AlignmentViewPanel viewPanel)
{
FeatureRenderer fr = viewPanel.getFeatureRenderer();
AlignmentViewPanel viewPanel)
{
FeatureRenderer fr = viewPanel.getFeatureRenderer();
@@
-1151,7
+1151,7
@@
public abstract class AAStructureBindingModel
{
if (startPos != -1)
{
{
if (startPos != -1)
{
- ChimeraCommands.addMapRange(colourMap, lastColour,
+ ChimeraCommands.addAtomSpecRange(colourMap, lastColour,
pdbfnum, startPos,
lastPos, lastChain);
}
pdbfnum, startPos,
lastPos, lastChain);
}
@@
-1164,7
+1164,8
@@
public abstract class AAStructureBindingModel
// final colour range
if (lastColour != null)
{
// final colour range
if (lastColour != null)
{
- ChimeraCommands.addMapRange(colourMap, lastColour, pdbfnum,
+ ChimeraCommands.addAtomSpecRange(colourMap, lastColour,
+ pdbfnum,
startPos, lastPos, lastChain);
}
// break;
startPos, lastPos, lastChain);
}
// break;