git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
textfield has focus
[jalview.git]
/
src
/
jalview
/
util
/
Comparison.java
diff --git
a/src/jalview/util/Comparison.java
b/src/jalview/util/Comparison.java
index
6c7197a
..
50472a5
100755
(executable)
--- a/
src/jalview/util/Comparison.java
+++ b/
src/jalview/util/Comparison.java
@@
-55,8
+55,8
@@
public class Comparison
*/
\r
public static float compare(SequenceI ii, SequenceI jj, int start, int end)
\r
{
\r
*/
\r
public static float compare(SequenceI ii, SequenceI jj, int start, int end)
\r
{
\r
- String si = ii.getSequence();
\r
- String sj = jj.getSequence();
\r
+ String si = ii.getSequenceAsString();
\r
+ String sj = jj.getSequenceAsString();
\r
\r
int ilen = si.length() - 1;
\r
int jlen = sj.length() - 1;
\r
\r
int ilen = si.length() - 1;
\r
int jlen = sj.length() - 1;
\r