- if (jobtitle.endsWith("alignment")) {
- if (submitGaps
- && (!jobtitle.endsWith("realignment")
- || !jobtitle.contains("profile"))) {
- int pos=jobtitle.indexOf("alignment");
- jobtitle = WebServiceName.substring(0, pos) + "re-alignment of "+altitle;
- } else {
- jobtitle = WebServiceName+" of "+altitle;
- }
- } else {
- jobtitle = WebServiceName+(submitGaps? " re" : " ") +"alignment of "+altitle;
+ if (jobtitle.endsWith("alignment"))
+ {
+ if (submitGaps
+ && (!jobtitle.endsWith("realignment")
+ || jobtitle.indexOf("profile") == -1))
+ {
+ int pos = jobtitle.indexOf("alignment");
+ jobtitle = WebServiceName.substring(0, pos) + "re-alignment of " +
+ altitle;
+ }
+ else
+ {
+ jobtitle = WebServiceName + " of " + altitle;
+ }
+ }
+ else
+ {
+ jobtitle = WebServiceName + (submitGaps ? " re" : " ") + "alignment of " +
+ altitle;