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JAL-4134 only build tree when showing it in the tree viewer..
[jalview.git]
/
src
/
jalview
/
ws
/
dbsources
/
EBIAlfaFold.java
diff --git
a/src/jalview/ws/dbsources/EBIAlfaFold.java
b/src/jalview/ws/dbsources/EBIAlfaFold.java
index
fd10c79
..
5ab05e0
100644
(file)
--- a/
src/jalview/ws/dbsources/EBIAlfaFold.java
+++ b/
src/jalview/ws/dbsources/EBIAlfaFold.java
@@
-448,7
+448,6
@@
public class EBIAlfaFold extends EbiFileRetrievedProxy
}
ContactMatrixI matrix = new PAEContactMatrix(sequence,
(Map<String, Object>) paeDict);
}
ContactMatrixI matrix = new PAEContactMatrix(sequence,
(Map<String, Object>) paeDict);
- matrix.setGroupSet(GroupSet.makeGroups(matrix, 5f, true));
AlignmentAnnotation cmannot = sequence.addContactList(matrix);
if (label != null)
AlignmentAnnotation cmannot = sequence.addContactList(matrix);
if (label != null)
@@
-506,7
+505,6
@@
public class EBIAlfaFold extends EbiFileRetrievedProxy
SequenceI seq = sm.getSequence();
ContactMatrixI matrix = new PAEContactMatrix(seq,
(Map<String, Object>) pae_obj);
SequenceI seq = sm.getSequence();
ContactMatrixI matrix = new PAEContactMatrix(seq,
(Map<String, Object>) pae_obj);
- matrix.setGroupSet(GroupSet.makeGroups(matrix, 5f, true));
AlignmentAnnotation cmannot = sm.getSequence().addContactList(matrix);
/* this already happens in Sequence.addContactList()
seq.addAlignmentAnnotation(cmannot);
AlignmentAnnotation cmannot = sm.getSequence().addContactList(matrix);
/* this already happens in Sequence.addContactList()
seq.addAlignmentAnnotation(cmannot);