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JAL-161 JAL-4173 allow trees embedded as NH tags in stockholm to be loaded as trees...
[jalview.git]
/
src
/
jalview
/
ws
/
ebi
/
EBIFetchClient.java
diff --git
a/src/jalview/ws/ebi/EBIFetchClient.java
b/src/jalview/ws/ebi/EBIFetchClient.java
index
b773d4e
..
65b9655
100644
(file)
--- a/
src/jalview/ws/ebi/EBIFetchClient.java
+++ b/
src/jalview/ws/ebi/EBIFetchClient.java
@@
-20,6
+20,8
@@
*/
package jalview.ws.ebi;
*/
package jalview.ws.ebi;
+import java.util.Locale;
+
import jalview.datamodel.DBRefSource;
import jalview.util.MessageManager;
import jalview.util.Platform;
import jalview.datamodel.DBRefSource;
import jalview.util.MessageManager;
import jalview.util.Platform;
@@
-265,6
+267,11
@@
public class EBIFetchClient
return null;
}
return null;
}
+ static
+ {
+ Platform.addJ2SDirectDatabaseCall("https://www.ebi.ac.uk/");
+ }
+
/**
* Constructs the URL to fetch from
*
/**
* Constructs the URL to fetch from
*
@@
-280,12
+287,13
@@
public class EBIFetchClient
|| database.equalsIgnoreCase(DBRefSource.EMBLCDS))
{
url = "https://www.ebi.ac.uk/ena/browser/api/embl/"
|| database.equalsIgnoreCase(DBRefSource.EMBLCDS))
{
url = "https://www.ebi.ac.uk/ena/browser/api/embl/"
- + ids.toLowerCase() + "?download=true&gzip=true";
+ + ids.toLowerCase(Locale.ROOT) + "?download=true&gzip=true";
}
else
{
url = "https://www.ebi.ac.uk/Tools/dbfetch/dbfetch/"
}
else
{
url = "https://www.ebi.ac.uk/Tools/dbfetch/dbfetch/"
- + database.toLowerCase() + "/" + ids.toLowerCase()
+ + database.toLowerCase(Locale.ROOT) + "/"
+ + ids.toLowerCase(Locale.ROOT)
+ (format != null ? "/" + format : "");
}
return url;
+ (format != null ? "/" + format : "");
}
return url;