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JAL-653 hold AlignedCodonFrame collections as list rather than set
[jalview.git]
/
src
/
jalview
/
ws
/
jws1
/
JPredThread.java
diff --git
a/src/jalview/ws/jws1/JPredThread.java
b/src/jalview/ws/jws1/JPredThread.java
index
8c7768d
..
8299e3c
100644
(file)
--- a/
src/jalview/ws/jws1/JPredThread.java
+++ b/
src/jalview/ws/jws1/JPredThread.java
@@
-123,7
+123,7
@@
class JPredThread extends JWS1Thread implements WSClientI
jalview.bin.Cache.log.debug("Getting associated alignment.");
// we ignore the returned alignment if we only predicted on a single
// sequence
jalview.bin.Cache.log.debug("Getting associated alignment.");
// we ignore the returned alignment if we only predicted on a single
// sequence
- String format = new jalview.io.IdentifyFile().Identify(
+ String format = new jalview.io.IdentifyFile().identify(
result.getAligfile(), "Paste");
if (jalview.io.FormatAdapter.isValidFormat(format))
result.getAligfile(), "Paste");
if (jalview.io.FormatAdapter.isValidFormat(format))