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--- Adding issue comments
[jalview.git]
/
src
/
jalview
/
ws
/
jws1
/
SeqSearchWSClient.java
diff --git
a/src/jalview/ws/jws1/SeqSearchWSClient.java
b/src/jalview/ws/jws1/SeqSearchWSClient.java
index
53338d3
..
04fb4b9
100644
(file)
--- a/
src/jalview/ws/jws1/SeqSearchWSClient.java
+++ b/
src/jalview/ws/jws1/SeqSearchWSClient.java
@@
-20,6
+20,7
@@
*/
package jalview.ws.jws1;
*/
package jalview.ws.jws1;
+import jalview.bin.Console;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.AlignmentView;
import jalview.gui.AlignFrame;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.AlignmentView;
import jalview.gui.AlignFrame;
@@
-56,8
+57,6
@@
public class SeqSearchWSClient extends WS1Client
*/
ext.vamsas.SeqSearchI server;
*/
ext.vamsas.SeqSearchI server;
- AlignFrame alignFrame;
-
/**
* Creates a new MsaWSClient object that uses a service given by an externally
* retrieved ServiceHandle
/**
* Creates a new MsaWSClient object that uses a service given by an externally
* retrieved ServiceHandle
@@
-84,7
+83,7
@@
public class SeqSearchWSClient extends WS1Client
// name to service client name
if (!sh.getAbstractName().equals(this.getServiceActionKey()))
{
// name to service client name
if (!sh.getAbstractName().equals(this.getServiceActionKey()))
{
- JvOptionPane.showMessageDialog(Desktop.desktop,
+ JvOptionPane.showMessageDialog(Desktop.getDesktopPane(),
MessageManager.formatMessage(
"label.service_called_is_not_seq_search_service",
new String[]
MessageManager.formatMessage(
"label.service_called_is_not_seq_search_service",
new String[]
@@
-97,7
+96,7
@@
public class SeqSearchWSClient extends WS1Client
if ((wsInfo = setWebService(sh)) == null)
{
if ((wsInfo = setWebService(sh)) == null)
{
- JvOptionPane.showMessageDialog(Desktop.desktop,
+ JvOptionPane.showMessageDialog(Desktop.getDesktopPane(),
MessageManager.formatMessage(
"label.seq_search_service_is_unknown", new String[]
{ sh.getName() }),
MessageManager.formatMessage(
"label.seq_search_service_is_unknown", new String[]
{ sh.getName() }),
@@
-272,7
+271,7
@@
public class SeqSearchWSClient extends WS1Client
.getSupportedDatabases();
} catch (Exception e)
{
.getSupportedDatabases();
} catch (Exception e)
{
- jalview.bin.Cache.log.warn(
+ Console.warn(
"Database list request failed, so disabling SeqSearch Service client "
+ sh.getName() + " at " + sh.getEndpointURL(),
e);
"Database list request failed, so disabling SeqSearch Service client "
+ sh.getName() + " at " + sh.getEndpointURL(),
e);