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JAL-3010 fix up bad merge from develop
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
AbstractJabaCalcWorker.java
diff --git
a/src/jalview/ws/jws2/AbstractJabaCalcWorker.java
b/src/jalview/ws/jws2/AbstractJabaCalcWorker.java
index
5961fc3
..
dd64e77
100644
(file)
--- a/
src/jalview/ws/jws2/AbstractJabaCalcWorker.java
+++ b/
src/jalview/ws/jws2/AbstractJabaCalcWorker.java
@@
-392,7
+392,8
@@
public abstract class AbstractJabaCalcWorker extends AlignCalcWorker
{
guiProgress.setProgressBar("", progressId);
}
{
guiProgress.setProgressBar("", progressId);
}
- ap.paintAlignment(true);
+ // TODO: may not need to paintAlignment again !
+ ap.paintAlignment(false, false);
}
if (msg.length() > 0)
{
}
if (msg.length() > 0)
{
@@
-602,7
+603,7
@@
public abstract class AbstractJabaCalcWorker extends AlignCalcWorker
protected boolean checkDone()
{
calcMan.notifyStart(this);
protected boolean checkDone()
{
calcMan.notifyStart(this);
- ap.paintAlignment(false);
+ ap.paintAlignment(false, false);
while (!calcMan.notifyWorking(this))
{
if (calcMan.isWorking(this))
while (!calcMan.notifyWorking(this))
{
if (calcMan.isWorking(this))
@@
-613,7
+614,7
@@
public abstract class AbstractJabaCalcWorker extends AlignCalcWorker
{
if (ap != null)
{
{
if (ap != null)
{
- ap.paintAlignment(false);
+ ap.paintAlignment(false, false);
}
Thread.sleep(200);
}
Thread.sleep(200);