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JAL-3070 use ArgumentI in all public constructors, convert to service specific argume...
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
JabawsCalcWorker.java
diff --git
a/src/jalview/ws/jws2/JabawsCalcWorker.java
b/src/jalview/ws/jws2/JabawsCalcWorker.java
index
fc36205
..
c70e721
100644
(file)
--- a/
src/jalview/ws/jws2/JabawsCalcWorker.java
+++ b/
src/jalview/ws/jws2/JabawsCalcWorker.java
@@
-26,6
+26,7
@@
import jalview.datamodel.SequenceI;
import jalview.gui.AlignFrame;
import jalview.util.MessageManager;
import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.gui.AlignFrame;
import jalview.util.MessageManager;
import jalview.ws.jws2.jabaws2.Jws2Instance;
+import jalview.ws.params.ArgumentI;
import jalview.ws.params.WsParamSetI;
import java.util.Iterator;
import jalview.ws.params.WsParamSetI;
import java.util.Iterator;
@@
-34,7
+35,6
@@
import java.util.List;
import compbio.data.msa.SequenceAnnotation;
import compbio.data.sequence.Score;
import compbio.data.sequence.ScoreManager;
import compbio.data.msa.SequenceAnnotation;
import compbio.data.sequence.Score;
import compbio.data.sequence.ScoreManager;
-import compbio.metadata.Argument;
import compbio.metadata.ChunkHolder;
import compbio.metadata.JobStatus;
import compbio.metadata.JobSubmissionException;
import compbio.metadata.ChunkHolder;
import compbio.metadata.JobStatus;
import compbio.metadata.JobSubmissionException;
@@
-50,7
+50,7
@@
public abstract class JabawsCalcWorker extends AbstractJabaCalcWorker
protected ScoreManager scoremanager;
public JabawsCalcWorker(Jws2Instance service, AlignFrame alignFrame,
protected ScoreManager scoremanager;
public JabawsCalcWorker(Jws2Instance service, AlignFrame alignFrame,
- WsParamSetI preset, List<Argument> paramset)
+ WsParamSetI preset, List<ArgumentI> paramset)
{
super(service, alignFrame, preset, paramset);
aaservice = (SequenceAnnotation) service.service;
{
super(service, alignFrame, preset, paramset);
aaservice = (SequenceAnnotation) service.service;