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JAL-1379 refactor Jws2 service client so dynamic services can be of any type of JABA...
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
RNAalifoldClient.java
diff --git
a/src/jalview/ws/jws2/RNAalifoldClient.java
b/src/jalview/ws/jws2/RNAalifoldClient.java
index
5d0df8a
..
fac0857
100644
(file)
--- a/
src/jalview/ws/jws2/RNAalifoldClient.java
+++ b/
src/jalview/ws/jws2/RNAalifoldClient.java
@@
-37,6
+37,7
@@
import java.util.TreeSet;
import java.util.regex.Pattern;
import compbio.data.sequence.RNAStructReader.AlifoldResult;
import java.util.regex.Pattern;
import compbio.data.sequence.RNAStructReader.AlifoldResult;
+import compbio.data.sequence.FastaSequence;
import compbio.data.sequence.RNAStructScoreManager;
import compbio.data.sequence.Range;
import compbio.data.sequence.Score;
import compbio.data.sequence.RNAStructScoreManager;
import compbio.data.sequence.Range;
import compbio.data.sequence.Score;
@@
-49,7
+50,7
@@
import compbio.metadata.Argument;
*
*/
*
*/
-public class RNAalifoldClient extends JabawsAlignCalcWorker implements
+public class RNAalifoldClient extends JabawsCalcWorker implements
AlignCalcWorkerI
{
AlignCalcWorkerI
{
@@
-109,6
+110,12
@@
public class RNAalifoldClient extends JabawsAlignCalcWorker implements
}
@Override
}
@Override
+ boolean checkValidInputSeqs(boolean dynamic, List<FastaSequence> seqs)
+ {
+ return (seqs.size() > 1);
+ }
+
+ @Override
public void updateResultAnnotation(boolean immediate)
{
public void updateResultAnnotation(boolean immediate)
{