private AlignmentAnnotation constructAnnotationFromScoreHolder(
AlignmentAnnotation annotation, String struct, TreeSet<Score> data)
{
private AlignmentAnnotation constructAnnotationFromScoreHolder(
AlignmentAnnotation annotation, String struct, TreeSet<Score> data)
{
}
anns[ri] = new Annotation(struct.substring(i, i + 1), "",
isSS(struct.charAt(i)), Float.NaN);
}
anns[ri] = new Annotation(struct.substring(i, i + 1), "",
isSS(struct.charAt(i)), Float.NaN);