- boolean sameResNum = (structResNum == prevStructResNum);
- // System.out.println(sequenceResNum + " : "
- // + (sameResNum ? -1 : prevStructResNum));
- mapping.put(sequenceResNum, new int[] {
- sameResNum ? -1 : prevStructResNum, -1 });
+ if (structResNum != prevStructResNum)
+ {
+ // System.out.println(sequenceResNum + " : " + prevStructResNum);
+ mapping.put(sequenceResNum, new int[] { prevStructResNum,
+ StructureMapping.UNASSIGNED });
+ }