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[jalview.git]
/
src
/
jalview
/
ws
/
seqfetcher
/
DbSourceProxy.java
diff --git
a/src/jalview/ws/seqfetcher/DbSourceProxy.java
b/src/jalview/ws/seqfetcher/DbSourceProxy.java
index
3dacb12
..
9fa904a
100644
(file)
--- a/
src/jalview/ws/seqfetcher/DbSourceProxy.java
+++ b/
src/jalview/ws/seqfetcher/DbSourceProxy.java
@@
-30,8
+30,7
@@
import com.stevesoft.pat.Regex;
* add/define mechanism for retrieval of Trees and distance matrices from a
\r
* database (unify with io)
\r
*
\r
* add/define mechanism for retrieval of Trees and distance matrices from a
\r
* database (unify with io)
\r
*
\r
- * @author JimP
\r
- * TODO: promote to API
\r
+ * @author JimP TODO: promote to API
\r
*/
\r
public interface DbSourceProxy
\r
{
\r
*/
\r
public interface DbSourceProxy
\r
{
\r
@@
-102,10
+101,14
@@
public interface DbSourceProxy
/**
\r
* make one or more queries to the database and attempt to parse the response
\r
* into an alignment
\r
/**
\r
* make one or more queries to the database and attempt to parse the response
\r
* into an alignment
\r
- * @param queries - one or more queries for database in expected form
\r
+ *
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+ * @param queries
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+ * - one or more queries for database in expected form
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* @return null if queries were successful but result was not parsable
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* @return null if queries were successful but result was not parsable
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- * @throws Exception - propagated from underlying transport to database (note - exceptions are not raised if query not found in database)
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- *
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+ * @throws Exception
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+ * - propagated from underlying transport to database (note -
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+ * exceptions are not raised if query not found in database)
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+ *
\r
*/
\r
public AlignmentI getSequenceRecords(String queries) throws Exception;
\r
\r
*/
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public AlignmentI getSequenceRecords(String queries) throws Exception;
\r
\r
@@
-122,10
+125,12
@@
public interface DbSourceProxy
*/
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public StringBuffer getRawRecords();
\r
\r
*/
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public StringBuffer getRawRecords();
\r
\r
-
\r
/**
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* Find out more info about the source.
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/**
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* Find out more info about the source.
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- * @param dbsourceproperty - one of the database reference source properties in jalview.datamodel.DBRefSource
\r
+ *
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+ * @param dbsourceproperty
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+ * - one of the database reference source properties in
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+ * jalview.datamodel.DBRefSource
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* @return true if the source has this property
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*/
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public boolean isA(Object dbsourceproperty);
\r
* @return true if the source has this property
\r
*/
\r
public boolean isA(Object dbsourceproperty);
\r