+ try(InputStream stream = client.getResultStream(job.getJobId(), "sto"))
+ {
+ StockholmFile file = new StockholmFile(new FileParse(
+ new BufferedReader(new InputStreamReader(stream)),
+ url.toString(), DataSourceType.URL));
+ var aln = new Alignment(file.getSeqsAsArray());
+ for (var annotation : file.getAnnotations())
+ aln.addAnnotation(annotation);
+ return aln;
+ }