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JAL-1601 Propagate hidden columns to the output alignment
[jalview.git]
/
src
/
jalview
/
ws2
/
gui
/
SearchServiceGuiHandler.java
diff --git
a/src/jalview/ws2/gui/SearchServiceGuiHandler.java
b/src/jalview/ws2/gui/SearchServiceGuiHandler.java
index
a57db1d
..
e66315f
100644
(file)
--- a/
src/jalview/ws2/gui/SearchServiceGuiHandler.java
+++ b/
src/jalview/ws2/gui/SearchServiceGuiHandler.java
@@
-8,6
+8,7
@@
import jalview.bin.Console;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.AlignmentI;
+import jalview.datamodel.HiddenColumns;
import jalview.gui.AlignFrame;
import jalview.gui.Desktop;
import jalview.gui.JvOptionPane;
import jalview.gui.AlignFrame;
import jalview.gui.Desktop;
import jalview.gui.JvOptionPane;
@@
-148,6
+149,8
@@
class SearchServiceGuiHandler implements TaskEventListener<AlignmentI>
if (idx >= 0)
alnCpy.setSeqrep(alnCpy.getSequenceAt(idx));
}
if (idx >= 0)
alnCpy.setSeqrep(alnCpy.getSequenceAt(idx));
}
+ if (result.getHiddenColumns() != null)
+ alnCpy.setHiddenColumns(new HiddenColumns(result.getHiddenColumns()));
displayResultsNewFrame(alnCpy);
});
SwingUtilities.invokeLater(infoPanel::setResultsReady);
displayResultsNewFrame(alnCpy);
});
SwingUtilities.invokeLater(infoPanel::setResultsReady);