+ /**
+ * Gets the value of the alcodon property.
+ *
+ * <p> This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will be
+ * present inside the JAXB object. This is why there is not a
+ * <CODE>set</CODE> method for the alcodon property.
+ *
+ * <p> For example, to add a new item, do as follows: <pre>
+ * getAlcodon().add(newItem); </pre>
+ *
+ *
+ * <p> Objects of the following type(s) are allowed in the list
+ * {@link AlcodonFrame.Alcodon }
+ *
+ *
+ */
+ public List<AlcodonFrame.Alcodon> getAlcodon()
+ {
+ if (alcodon == null)
+ {
+ alcodon = new ArrayList<AlcodonFrame.Alcodon>();
+ }
+ return this.alcodon;
+ }
+
+ /**
+ * Gets the value of the alcodMap property.
+ *
+ * <p> This accessor method returns a reference to the live list, not a
+ * snapshot. Therefore any modification you make to the returned list will be
+ * present inside the JAXB object. This is why there is not a
+ * <CODE>set</CODE> method for the alcodMap property.
+ *
+ * <p> For example, to add a new item, do as follows: <pre>
+ * getAlcodMap().add(newItem); </pre>
+ *
+ *
+ * <p> Objects of the following type(s) are allowed in the list
+ * {@link AlcodonFrame.AlcodMap }
+ *
+ *
+ */
+ public List<AlcodonFrame.AlcodMap> getAlcodMap()
+ {
+ if (alcodMap == null)
+ {
+ alcodMap = new ArrayList<AlcodonFrame.AlcodMap>();
+ }
+ return this.alcodMap;
+ }
+
+ /**
+ * <p>Java class for anonymous complex type.
+ *
+ * <p>The following schema fragment specifies the expected content
+ * contained within this class.
+ *
+ * <pre> &lt;complexType&gt; &lt;complexContent&gt;
+ * &lt;restriction
+ * base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
+ * &lt;sequence&gt; &lt;element
+ * ref="{www.vamsas.ac.uk/jalview/version2}Mapping"/&gt;
+ * &lt;/sequence&gt; &lt;attribute name="dnasq" use="required"
+ * type="{http://www.w3.org/2001/XMLSchema}string" /&gt;
+ * &lt;/restriction&gt; &lt;/complexContent&gt;
+ * &lt;/complexType&gt; </pre>
+ *
+ *
+ */
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = { "mapping" })
+ public static class AlcodMap
+ {
+
+ @XmlElement(name = "Mapping", required = true)
+ protected Mapping mapping;
+
+ @XmlAttribute(name = "dnasq", required = true)
+ protected String dnasq;