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JAL-2465 missed commit for refactore renaming of getPdbFile() method to getStructureF...
[jalview.git]
/
test
/
jalview
/
analysis
/
TestAlignSeq.java
diff --git
a/test/jalview/analysis/TestAlignSeq.java
b/test/jalview/analysis/TestAlignSeq.java
index
2dee421
..
9fc88ea
100644
(file)
--- a/
test/jalview/analysis/TestAlignSeq.java
+++ b/
test/jalview/analysis/TestAlignSeq.java
@@
-1,6
+1,6
@@
/*
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*
* This file is part of Jalview.
*
@@
-26,9
+26,11
@@
import static org.testng.AssertJUnit.assertNull;
import jalview.datamodel.Mapping;
import jalview.datamodel.Sequence;
import jalview.datamodel.SequenceI;
import jalview.datamodel.Mapping;
import jalview.datamodel.Sequence;
import jalview.datamodel.SequenceI;
+import jalview.gui.JvOptionPane;
import java.io.PrintStream;
import java.io.PrintStream;
+import org.testng.annotations.BeforeClass;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Test;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Test;
@@
-41,6
+43,13
@@
import org.testng.annotations.Test;
public class TestAlignSeq
{
public class TestAlignSeq
{
+ @BeforeClass(alwaysRun = true)
+ public void setUpJvOptionPane()
+ {
+ JvOptionPane.setInteractiveMode(false);
+ JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+ }
+
SequenceI s1, s2, s3;
/**
SequenceI s1, s2, s3;
/**
@@
-119,7
+128,7
@@
public class TestAlignSeq
String expected = "Score = 320\nLength of alignment = 10\nSequence Seq1 : 3 - 18 (Sequence length = 14)\nSequence Seq1 : 1 - 10 (Sequence length = 10)\n\n"
+ "Seq1 SDFAQQQRRR\n"
+ " ||||||| \n"
String expected = "Score = 320\nLength of alignment = 10\nSequence Seq1 : 3 - 18 (Sequence length = 14)\nSequence Seq1 : 1 - 10 (Sequence length = 10)\n\n"
+ "Seq1 SDFAQQQRRR\n"
+ " ||||||| \n"
- + "Seq1 SDFAQQQSSS\n\n" + "Percentage ID = 70.00\n\n";
+ + "Seq1 SDFAQQQSSS\n\n" + "Percentage ID = 70.00\n";
assertEquals(expected, baos.toString());
}
}
assertEquals(expected, baos.toString());
}
}