+ "CMD [-features examples/testdata/plantfdx.features] executed successfully!",
+ "Failed command : -features examples/testdata/plantfdx.features" },
+ {
+ "CMD [-annotations examples/testdata/plantfdx.annotations] executed successfully!",
+ "Failed command : -annotations examples/testdata/plantfdx.annotations" },
+ {
+ "CMD [-tree examples/testdata/uniref50_test_tree] executed successfully!",
+ "Failed command : -tree examples/testdata/uniref50_test_tree" },
+ // non headless mode input operations
+ { "CMD [-nousagestats] executed successfully!",
+ "Failed command : -nousagestats" },
+ { "CMD [-noquestionnaire] executed successfully!",
+ "Failed command : -noquestionnaire nickname=www.test.com" } };
+
+ }
+
+ @DataProvider(name = "headlessModeOutputOperationsData")
+ public static Object[][] getHeadlessModeOutputParams()
+ {
+ return new Object[][] {
+ { "nodisplay -open examples/uniref50.fa", " -eps",
+ "test_uniref50_out.eps", true, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "nodisplay -open examples/uniref50.fa", " -eps",
+ "test_uniref50_out.eps", false, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "nogui -open examples/uniref50.fa", " -eps",
+ "test_uniref50_out.eps", true, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "nogui -open examples/uniref50.fa", " -eps",
+ "test_uniref50_out.eps", false, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -eps",
+ "test_uniref50_out.eps", true, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -svg",
+ "test_uniref50_out.svg", false, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -png",
+ "test_uniref50_out.png", true, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -html",
+ "test_uniref50_out.html", true, MINFILESIZE_BIG, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -fasta",
+ "test_uniref50_out.mfa", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -clustal",
+ "test_uniref50_out.aln", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -msf",
+ "test_uniref50_out.msf", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -pileup",
+ "test_uniref50_out.aln", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -pir",
+ "test_uniref50_out.pir", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -pfam",
+ "test_uniref50_out.pfam", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -blc",
+ "test_uniref50_out.blc", true, MINFILESIZE_SMALL, TEST_TIMEOUT },
+ { "headless -open examples/uniref50.fa", " -jalview",
+ "test_uniref50_out.jvp", true, MINFILESIZE_SMALL, TEST_TIMEOUT }, };