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Merge branch 'jims/bug/JAL-4298_java_console_causing_hang_at_startup' into develop
[jalview.git]
/
test
/
jalview
/
bin
/
CommandsTest.java
diff --git
a/test/jalview/bin/CommandsTest.java
b/test/jalview/bin/CommandsTest.java
index
ecec67d
..
de6185c
100644
(file)
--- a/
test/jalview/bin/CommandsTest.java
+++ b/
test/jalview/bin/CommandsTest.java
@@
-111,13
+111,13
@@
public class CommandsTest
Assert.assertEquals(cmds.argsWereParsed(), cmdArgs,
"Overall command parse and operation is false");
Assert.assertEquals(cmds.argsWereParsed(), cmdArgs,
"Overall command parse and operation is false");
- Assert.assertEquals(Desktop.getAlignFrames().length, numFrames,
+ Assert.assertEquals(Desktop.getDesktopAlignFrames().length, numFrames,
"Wrong number of AlignFrames");
if (sequences != null)
{
Set<String> openedSequenceNames = new HashSet<>();
"Wrong number of AlignFrames");
if (sequences != null)
{
Set<String> openedSequenceNames = new HashSet<>();
- AlignFrame[] afs = Desktop.getAlignFrames();
+ AlignFrame[] afs = Desktop.getDesktopAlignFrames();
for (AlignFrame af : afs)
{
openedSequenceNames.addAll(
for (AlignFrame af : afs)
{
openedSequenceNames.addAll(
@@
-325,7
+325,7
@@
public class CommandsTest
public static boolean lookForSequenceName(String sequenceName)
{
public static boolean lookForSequenceName(String sequenceName)
{
- AlignFrame[] afs = Desktop.getAlignFrames();
+ AlignFrame[] afs = Desktop.getDesktopAlignFrames();
for (AlignFrame af : afs)
{
for (String name : af.getViewport().getAlignment().getSequenceNames())
for (AlignFrame af : afs)
{
for (String name : af.getViewport().getAlignment().getSequenceNames())