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Merge branch 'patch/JAL-2754_patch2104forJava8' into releases/Release_2_10_4_Branch
[jalview.git]
/
test
/
jalview
/
datamodel
/
CigarArrayTest.java
diff --git
a/test/jalview/datamodel/CigarArrayTest.java
b/test/jalview/datamodel/CigarArrayTest.java
index
20dcc96
..
7bee423
100644
(file)
--- a/
test/jalview/datamodel/CigarArrayTest.java
+++ b/
test/jalview/datamodel/CigarArrayTest.java
@@
-68,8
+68,13
@@
public class CigarArrayTest
// we are comparing a sequence to its own subsequence (the group) + hidden
// columns.
// we are comparing a sequence to its own subsequence (the group) + hidden
// columns.
- CigarArray cig = new CigarArray(al, hc, sg1);
+ // no hidden columns case
+ CigarArray cig = new CigarArray(al, null, sg1);
String result = cig.getCigarstring();
String result = cig.getCigarstring();
+ assertEquals(result, "22M");
+
+ cig = new CigarArray(al, hc, sg1);
+ result = cig.getCigarstring();
assertEquals(result, "1M4D9M5D3M");
// group starts at hidden cols
assertEquals(result, "1M4D9M5D3M");
// group starts at hidden cols