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JAL-2154 canonical dbsources are lowercased before matching
[jalview.git]
/
test
/
jalview
/
ext
/
ensembl
/
EnsemblSeqProxyTest.java
diff --git
a/test/jalview/ext/ensembl/EnsemblSeqProxyTest.java
b/test/jalview/ext/ensembl/EnsemblSeqProxyTest.java
index
6ce8a3b
..
2d3948f
100644
(file)
--- a/
test/jalview/ext/ensembl/EnsemblSeqProxyTest.java
+++ b/
test/jalview/ext/ensembl/EnsemblSeqProxyTest.java
@@
-6,7
+6,6
@@
import static org.testng.AssertJUnit.assertTrue;
import static org.testng.internal.junit.ArrayAsserts.assertArrayEquals;
import jalview.datamodel.Alignment;
import static org.testng.internal.junit.ArrayAsserts.assertArrayEquals;
import jalview.datamodel.Alignment;
-import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import jalview.io.AppletFormatAdapter;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import jalview.io.AppletFormatAdapter;
@@
-16,10
+15,7
@@
import jalview.io.gff.SequenceOntologyFactory;
import jalview.io.gff.SequenceOntologyLite;
import java.lang.reflect.Method;
import jalview.io.gff.SequenceOntologyLite;
import java.lang.reflect.Method;
-import java.net.MalformedURLException;
-import java.net.URL;
import java.util.Arrays;
import java.util.Arrays;
-import java.util.List;
import org.testng.Assert;
import org.testng.annotations.AfterClass;
import org.testng.Assert;
import org.testng.annotations.AfterClass;
@@
-109,13
+105,13
@@
public class EnsemblSeqProxyTest
+ "NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS\n"
+ "LPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH" } };
+ "NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS\n"
+ "LPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH" } };
- @BeforeClass
+ @BeforeClass(alwaysRun = true)
public void setUp()
{
SequenceOntologyFactory.setInstance(new SequenceOntologyLite());
}
public void setUp()
{
SequenceOntologyFactory.setInstance(new SequenceOntologyLite());
}
- @AfterClass
+ @AfterClass(alwaysRun = true)
public void tearDown()
{
SequenceOntologyFactory.setInstance(null);
public void tearDown()
{
SequenceOntologyFactory.setInstance(null);