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Merge branch 'develop' into update_212_Dec_merge_with_21125_chamges
[jalview.git]
/
test
/
jalview
/
ext
/
jmol
/
JmolCommandsTest.java
diff --git
a/test/jalview/ext/jmol/JmolCommandsTest.java
b/test/jalview/ext/jmol/JmolCommandsTest.java
index
9684603
..
88e5833
100644
(file)
--- a/
test/jalview/ext/jmol/JmolCommandsTest.java
+++ b/
test/jalview/ext/jmol/JmolCommandsTest.java
@@
-77,7
+77,7
@@
public class JmolCommandsTest
SequenceRenderer sr = new SequenceRenderer(af.getViewport());
SequenceI[][] seqs = new SequenceI[][] { { seq1 }, { seq2 } };
String[] files = new String[] { "seq1.pdb", "seq2.pdb" };
SequenceRenderer sr = new SequenceRenderer(af.getViewport());
SequenceI[][] seqs = new SequenceI[][] { { seq1 }, { seq2 } };
String[] files = new String[] { "seq1.pdb", "seq2.pdb" };
- StructureSelectionManager ssm = new StructureSelectionManager();
+ StructureSelectionManager ssm = StructureSelectionManager.getStructureSelectionManager(null);
/*
* map residues 1-10 to residues 21-30 (atoms 105-150) in structures
/*
* map residues 1-10 to residues 21-30 (atoms 105-150) in structures
@@
-94,6
+94,7
@@
public class JmolCommandsTest
"B", map, null);
ssm.addStructureMapping(sm2);
"B", map, null);
ssm.addStructureMapping(sm2);
+ // TODO - comments in testee suggest this tests an obsolete method!
String[] commands = testee.colourBySequence(ssm, files, seqs, sr,
af.alignPanel);
assertEquals(commands.length, 2);
String[] commands = testee.colourBySequence(ssm, files, seqs, sr,
af.alignPanel);
assertEquals(commands.length, 2);