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JAL-32423 tidying
[jalview.git]
/
test
/
jalview
/
gui
/
AlignViewportTest.java
diff --git
a/test/jalview/gui/AlignViewportTest.java
b/test/jalview/gui/AlignViewportTest.java
index
3ba93bc
..
891a203
100644
(file)
--- a/
test/jalview/gui/AlignViewportTest.java
+++ b/
test/jalview/gui/AlignViewportTest.java
@@
-274,7
+274,7
@@
public class AlignViewportTest
* Test for JAL-1306 - conservation thread should run even when only Quality
* (and not Conservation) is enabled in Preferences
*/
* Test for JAL-1306 - conservation thread should run even when only Quality
* (and not Conservation) is enabled in Preferences
*/
- @Test(groups = { "Functional" }, timeOut = 2000) // BH removed timeOut=2000
+ @Test(groups = { "Functional" }, timeOut = 2000)
public void testUpdateConservation_qualityOnly()
{
Cache.setPropertyNoSave("SHOW_ANNOTATIONS",
public void testUpdateConservation_qualityOnly()
{
Cache.setPropertyNoSave("SHOW_ANNOTATIONS",
@@
-296,8
+296,8
@@
public class AlignViewportTest
AlignViewport viewport = af.getViewport();
synchronized (this)
{
AlignViewport viewport = af.getViewport();
synchronized (this)
{
- System.out.println("AVT consv: "
- + viewport.getAlignmentConservationAnnotation());
+ // System.out.println("AVT consv: "
+ // + viewport.getAlignmentConservationAnnotation());
try
{
wait(250); // BH increased from 50 -- was getting Quality in column 1
try
{
wait(250); // BH increased from 50 -- was getting Quality in column 1
@@
-305,8
+305,8
@@
public class AlignViewportTest
} catch (InterruptedException e)
{
}
} catch (InterruptedException e)
{
}
- System.out.println("AVT consv: "
- + viewport.getAlignmentConservationAnnotation());
+ // System.out.println("AVT consv: "
+ // + viewport.getAlignmentConservationAnnotation());
while (viewport.getAlignmentConservationAnnotation() != null)
{
try
while (viewport.getAlignmentConservationAnnotation() != null)
{
try
@@
-488,7
+488,7
@@
public class AlignViewportTest
// af.paintImmediately(af.getBounds());
AlignViewport testme = af.getViewport();
SequenceI cons = testme.getConsensusSeq();
// af.paintImmediately(af.getBounds());
AlignViewport testme = af.getViewport();
SequenceI cons = testme.getConsensusSeq();
- System.out.println("AVT " + cons.getSequenceAsString());
+ // System.out.println("AVT " + cons.getSequenceAsString());
assertEquals("A-C", cons.getSequenceAsString());
}
assertEquals("A-C", cons.getSequenceAsString());
}