- public void testGetColourScheme_forViewport()
- {
- AlignFrame af = new FileLoader().LoadFileWaitTillLoaded(
- ">seq1\nAGLRTWQU", DataSourceType.PASTE);
- ColourSchemes cs = ColourSchemes.getInstance();
-
- AlignViewport viewport = af.getViewport();
- AlignmentI alignment = viewport.getAlignment();
- assertTrue(cs.getColourScheme(JalviewColourScheme.Blosum62.toString(),
- alignment) instanceof Blosum62ColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Buried.toString(),
- alignment) instanceof BuriedColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Clustal.toString(),
- alignment) instanceof ClustalxColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Helix.toString(),
- alignment) instanceof HelixColourScheme);
- assertTrue(cs.getColourScheme(
- JalviewColourScheme.Hydrophobic.toString(), alignment) instanceof HydrophobicColourScheme);
- assertTrue(cs.getColourScheme(
- JalviewColourScheme.Nucleotide.toString(), alignment) instanceof NucleotideColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.PID.toString(),
- alignment) instanceof PIDColourScheme);
- assertTrue(cs.getColourScheme(
- JalviewColourScheme.PurinePyrimidine.toString(), alignment) instanceof PurinePyrimidineColourScheme);
- assertTrue(cs.getColourScheme(
- JalviewColourScheme.RNAHelices.toString(), alignment) instanceof RNAHelicesColour);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Strand.toString(),
- alignment) instanceof StrandColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Taylor.toString(),
- alignment) instanceof TaylorColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.TCoffee.toString(),
- alignment) instanceof TCoffeeColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Turn.toString(),
- alignment) instanceof TurnColourScheme);
- assertTrue(cs.getColourScheme(JalviewColourScheme.Zappo.toString(),
- alignment) instanceof ZappoColourScheme);
- af.closeMenuItem_actionPerformed(true);
- }
-
- @Test(groups = "Functional")
- public void testGetColourScheme_forAnnotatedCollection()