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JAL-2938 extracted base class for Hmmer colour schems
[jalview.git]
/
test
/
jalview
/
schemes
/
HmmerGlobalBackgroundTest.java
diff --git
a/test/jalview/schemes/HMMERColourSchemeTest.java
b/test/jalview/schemes/HmmerGlobalBackgroundTest.java
similarity index 95%
rename from
test/jalview/schemes/HMMERColourSchemeTest.java
rename to
test/jalview/schemes/HmmerGlobalBackgroundTest.java
index
9d8093d
..
b417482
100644
(file)
--- a/
test/jalview/schemes/HMMERColourSchemeTest.java
+++ b/
test/jalview/schemes/HmmerGlobalBackgroundTest.java
@@
-11,7
+11,7
@@
import java.net.MalformedURLException;
import org.testng.annotations.Test;
import org.testng.annotations.Test;
-public class HMMERColourSchemeTest {
+public class HmmerGlobalBackgroundTest {
@Test(groups = "Functional")
public void testFindColour() throws MalformedURLException, IOException
@Test(groups = "Functional")
public void testFindColour() throws MalformedURLException, IOException
@@
-19,7
+19,7
@@
public class HMMERColourSchemeTest {
HMMFile file = new HMMFile("test/jalview/io/test_PKinase_hmm.txt",
DataSourceType.FILE);
HMMFile file = new HMMFile("test/jalview/io/test_PKinase_hmm.txt",
DataSourceType.FILE);
- ColourSchemeI scheme = new HMMERColourScheme(file.getHMM());
+ ColourSchemeI scheme = new HmmerGlobalBackground(file.getHMM());
/*
* 'A' in column 1, node 2, match emission 2.77204
/*
* 'A' in column 1, node 2, match emission 2.77204