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JAL-3760 fix tests for changed behaviour
[jalview.git]
/
test
/
jalview
/
util
/
ComparisonTest.java
diff --git
a/test/jalview/util/ComparisonTest.java
b/test/jalview/util/ComparisonTest.java
index
6f6841d
..
2e646f5
100644
(file)
--- a/
test/jalview/util/ComparisonTest.java
+++ b/
test/jalview/util/ComparisonTest.java
@@
-85,15
+85,15
@@
public class ComparisonTest
seq = new Sequence("DNA", "ACTugGCCAG");
SequenceI seq2 = new Sequence("Protein", "FLIMVSPTYW");
/*
seq = new Sequence("DNA", "ACTugGCCAG");
SequenceI seq2 = new Sequence("Protein", "FLIMVSPTYW");
/*
- * 90% DNA:
+ * 90% DNA but one protein sequence - expect false
*/
*/
- assertTrue(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
+ assertFalse(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
seq, seq, seq, seq, seq, seq, seq2 }));
seq, seq, seq, seq, seq, seq, seq2 }));
- assertTrue(Comparison.isNucleotide(new SequenceI[][] {
+ assertFalse(Comparison.isNucleotide(new SequenceI[][] {
new SequenceI[] { seq }, new SequenceI[] { seq, seq, seq },
new SequenceI[] { seq, seq, seq, seq, seq, seq2 } }));
/*
new SequenceI[] { seq }, new SequenceI[] { seq, seq, seq },
new SequenceI[] { seq, seq, seq, seq, seq, seq2 } }));
/*
- * 80% DNA:
+ * 80% DNA but one protein sequence - Expect false
*/
assertFalse(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
seq, seq, seq, seq, seq, seq2, seq2 }));
*/
assertFalse(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
seq, seq, seq, seq, seq, seq2, seq2 }));