- assertTrue(Comparison.isNucleotide(new SequenceI[]
- { seq, seq, seq, seq, seq, seq, seq, seq, seq, seq2 })); // 90% DNA
- assertFalse(Comparison.isNucleotide(new SequenceI[]
- { seq, seq, seq, seq, seq, seq, seq, seq, seq2, seq2 })); // 80% DNA
+ /*
+ * 90% DNA:
+ */
+ assertTrue(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
+ seq, seq, seq, seq, seq, seq, seq2 }));
+ assertTrue(Comparison.isNucleotide(new SequenceI[][] {
+ new SequenceI[] { seq }, new SequenceI[] { seq, seq, seq },
+ new SequenceI[] { seq, seq, seq, seq, seq, seq2 } }));
+ /*
+ * 80% DNA:
+ */
+ assertFalse(Comparison.isNucleotide(new SequenceI[] { seq, seq, seq,
+ seq, seq, seq, seq, seq, seq2, seq2 }));
+ assertFalse(Comparison.isNucleotide(new SequenceI[][] { new SequenceI[]
+ { seq }, new SequenceI[] { seq, seq, seq },
+ new SequenceI[] { seq, seq, seq, seq, seq2, seq2, null } }));