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[jalview.git]
/
test
/
jalview
/
ws
/
PDBSequenceFetcherTest.java
diff --git
a/test/jalview/ws/PDBSequenceFetcherTest.java
b/test/jalview/ws/PDBSequenceFetcherTest.java
index
e54d5b9
..
86439fc
100644
(file)
--- a/
test/jalview/ws/PDBSequenceFetcherTest.java
+++ b/
test/jalview/ws/PDBSequenceFetcherTest.java
@@
-37,7
+37,7
@@
public class PDBSequenceFetcherTest
SequenceFetcher sf;
SequenceFetcher sf;
- @BeforeMethod
+ @BeforeMethod(alwaysRun = true)
public void setUp() throws Exception
{
// ensure 'add annotation from structure' is selected
public void setUp() throws Exception
{
// ensure 'add annotation from structure' is selected
@@
-50,7
+50,7
@@
public class PDBSequenceFetcherTest
}
@Test(groups =
}
@Test(groups =
- { "Functional" }, enabled = false)
+ { "Network" }, enabled = true)
public void testRnaSeqRetrieve() throws Exception
{
List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
public void testRnaSeqRetrieve() throws Exception
{
List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
@@
-61,7
+61,7
@@
public class PDBSequenceFetcherTest
{
assertTrue("No annotation transfered to sequence.",
sq.getAnnotation().length > 0);
{
assertTrue("No annotation transfered to sequence.",
sq.getAnnotation().length > 0);
- assertTrue("No PDBEntry on sequence.", sq.getPDBId().size() > 0);
+ assertTrue("No PDBEntry on sequence.", sq.getAllPDBEntries().size() > 0);
assertTrue("No RNA annotation on sequence.", sq.getRNA() != null);
}
}
assertTrue("No RNA annotation on sequence.", sq.getRNA() != null);
}
}