git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
develop merge
[jalview.git]
/
test
/
jalview
/
ws
/
PDBSequenceFetcherTest.java
diff --git
a/test/jalview/ws/PDBSequenceFetcherTest.java
b/test/jalview/ws/PDBSequenceFetcherTest.java
index
adf53f5
..
d020173
100644
(file)
--- a/
test/jalview/ws/PDBSequenceFetcherTest.java
+++ b/
test/jalview/ws/PDBSequenceFetcherTest.java
@@
-37,7
+37,7
@@
public class PDBSequenceFetcherTest
SequenceFetcher sf;
SequenceFetcher sf;
- @BeforeMethod(alwaysRun = true)
+ @BeforeMethod(alwaysRun = true)
public void setUp() throws Exception
{
// ensure 'add annotation from structure' is selected
public void setUp() throws Exception
{
// ensure 'add annotation from structure' is selected
@@
-57,8
+57,7
@@
public class PDBSequenceFetcherTest
*
* @throws Exception
*/
*
* @throws Exception
*/
- @Test(groups =
- { "Network" }, enabled = true)
+ @Test(groups = { "Network" }, enabled = true)
public void testRnaSeqRetrieve() throws Exception
{
List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
public void testRnaSeqRetrieve() throws Exception
{
List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
@@
-69,7
+68,8
@@
public class PDBSequenceFetcherTest
{
assertTrue("No annotation transfered to sequence.",
sq.getAnnotation().length > 0);
{
assertTrue("No annotation transfered to sequence.",
sq.getAnnotation().length > 0);
- assertTrue("No PDBEntry on sequence.", sq.getAllPDBEntries().size() > 0);
+ assertTrue("No PDBEntry on sequence.",
+ sq.getAllPDBEntries().size() > 0);
assertTrue(
"No RNA annotation on sequence, possibly http://arn-ibmc.in2p3.fr/api/compute/2d not available?",
sq.getRNA() != null);
assertTrue(
"No RNA annotation on sequence, possibly http://arn-ibmc.in2p3.fr/api/compute/2d not available?",
sq.getRNA() != null);