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JAL-1628 drop getShowAnnotation accessor in favour of isShowAnnotation in AlignViewpo...
[jalview.git]
/
test
/
jalview
/
ws
/
jabaws
/
JpredJabaStructExportImport.java
diff --git
a/test/jalview/ws/jabaws/JpredJabaStructExportImport.java
b/test/jalview/ws/jabaws/JpredJabaStructExportImport.java
index
f0b8f99
..
1e920e0
100644
(file)
--- a/
test/jalview/ws/jabaws/JpredJabaStructExportImport.java
+++ b/
test/jalview/ws/jabaws/JpredJabaStructExportImport.java
@@
-186,9
+186,8
@@
public class JpredJabaStructExportImport
String aligfileout = new FormatAdapter().formatSequences("PFAM",
al.getSequencesArray());
String aligfileout = new FormatAdapter().formatSequences("PFAM",
al.getSequencesArray());
- String anfileout = new AnnotationFile().printAnnotations(
- al.getAlignmentAnnotation(), al.getGroups(),
- al.getProperties());
+ String anfileout = new AnnotationFile()
+ .printAnnotationsForAlignment(al);
assertTrue(
"Test "
+ testname
assertTrue(
"Test "
+ testname