}
+
// in ext the values are cast to Object. Ensure string values are cast as String (and not GStringImpl) for later use
def string(Object o) {
return o == null ? "" : o.toString()
.replaceAll("_*-_*", "-") // collapse _-_
.toLowerCase()
+ getdownWrapperLink = install4jUnixApplicationFolder // e.g. "jalview_local"
getdownAppDir = string("${getdownWebsiteDir}/${getdownAppDistDir}")
//getdownJ11libDir = "${getdownWebsiteDir}/${getdown_j11lib_dir}"
getdownResourceDir = string("${getdownWebsiteDir}/${getdown_resource_dir}")
args = [ "${helpBuildDir}/${help_dir}", "-nointernet" ]
def outFOS = new FileOutputStream(helpLinksCheckerOutFile, false) // false == don't append
- def errFOS = outFOS
standardOutput = new org.apache.tools.ant.util.TeeOutputStream(
outFOS,
- standardOutput)
+ System.out)
errorOutput = new org.apache.tools.ant.util.TeeOutputStream(
outFOS,
- errorOutput)
+ System.err)
inputs.dir(helpBuildDir)
outputs.file(helpLinksCheckerOutFile)
def outputDir = "${jalviewDir}/${package_dir}"
destinationDirectory = file(outputDir)
archiveFileName = rootProject.name+".jar"
+ duplicatesStrategy "EXCLUDE"
+
exclude "cache*/**"
exclude "*.jar"
attributes "Implementation-Version": JALVIEW_VERSION,
"Application-Name": install4jApplicationName
}
+
+ duplicatesStrategy "INCLUDE"
+
mainClassName = shadow_jar_main_class
mergeServiceFiles()
classifier = "all-"+JALVIEW_VERSION+"-j"+JAVA_VERSION
}
}
- def getdownWrapperScripts = [ getdown_bash_wrapper_script, getdown_powershell_wrapper_script ]
+ def getdownWrapperScripts = [ getdown_bash_wrapper_script, getdown_powershell_wrapper_script, getdown_batch_wrapper_script ]
getdownWrapperScripts.each{ script ->
def s = file( "${jalviewDir}/utils/getdown/${getdown_wrapper_script_dir}/${script}" )
if (s.exists()) {
'WINDOWS_APPLICATION_ID': install4jWinApplicationId,
'MACOS_DMG_DS_STORE': install4jDMGDSStore,
'MACOS_DMG_BG_IMAGE': install4jDMGBackgroundImage,
- 'WRAPPER_LINK': getdown_wrapper_link,
+ 'WRAPPER_LINK': getdownWrapperLink,
'BASH_WRAPPER_SCRIPT': getdown_bash_wrapper_script,
'POWERSHELL_WRAPPER_SCRIPT': getdown_powershell_wrapper_script,
'WRAPPER_SCRIPT_BIN_DIR': getdown_wrapper_script_dir,
preserve {
include "**"
}
+
+ // should this be exclude really ?
+ duplicatesStrategy "INCLUDE"
+
outputs.files outputFiles
inputs.files inputFiles
}
new org.apache.tools.ant.util.TeeOutputStream(
logOutFOS,
stdout),
- standardOutput)
+ System.out)
errorOutput = new org.apache.tools.ant.util.TeeOutputStream(
new org.apache.tools.ant.util.TeeOutputStream(
logErrFOS,
stderr),
- errorOutput)
+ System.err)
} else {
standardOutput = new org.apache.tools.ant.util.TeeOutputStream(
logOutFOS,
new org.apache.tools.ant.util.TeeOutputStream(
logErrFOS,
stderr),
- errorOutput)
+ System.err)
} else {
standardOutput = new org.apache.tools.ant.util.TeeOutputStream(
logOutFOS,
def htmlFile = "${jalviewDirAbsolutePath}/${filename}"
doLast {
- SimpleHttpFileServerFactory factory = new SimpleHttpFileServerFactory()
+ def factory
+ try {
+ def f = Class.forName("org.gradle.plugins.javascript.envjs.http.simple.SimpleHttpFileServerFactory")
+ factory = f.newInstance()
+ } catch (ClassNotFoundException e) {
+ throw new GradleException("Unable to create SimpleHttpFileServerFactory")
+ }
def port = Integer.valueOf(jalviewjs_server_port)
def start = port
def running = false