property to configure webstart image

[jalview.git] / examples / jalviewLiteJs.html

diff --git a/examples/jalviewLiteJs.html b/examples/jalviewLiteJs.html
index d0691b6..5d0af5d 100644 (file)
--- a/examples/jalviewLiteJs.html
+++ b/examples/jalviewLiteJs.html
@@ -148,21 +148,14 @@ document.onclick = mclose;
 <li><a href="appletParameters.html">Applet Parameters</a></li>
 <li class="jvlite-nav-small"><a href="jalviewLiteJs.html">Javascript API</a></li>
 <li><a href="formComplete.html">in-page API demo</a></li>
-<li><a href="linkedApplets_ng.html">Two JalviewLites demo</a></li>
-<li><a href="embeddedWJmol.html">Sequence And Structure demo</a></li>
+<li><a href="linkedapplets_ng.html">Two JalviewLites demo</a></li>
+<li><a href="embeddedWJmol.html">Jalview and Jmol demo</a></li>
 </ul>
 </div>
 
 <div id="content" class="content"> 
                <p>The jalviewLite applet's application programming interface (API) includes two components. A <a href="javascript/jalview.js">JalviewLite Javascript Library</a> and the <a href="#api">public methods on the JalviewLite applet</a>.
 </p>
-               <p>The best way to learn how to use the API is to see it in action on the demonstration pages below:</p>
-               <ul>
-          <li><a href="formComplete.html">use Javascript to control and get data from JalviewLite</a></li>
-          <li><a href="linkedapplets_ng.html">use Javascript to make two jalviewLite instances talk to each other.</a></li>
-          <li><a href="embeddedWJmol.html">configure JalviewLite to talk to a Jmol applet on the page (EXPERIMENTAL! please provide feedback!).</a></li>
-          <li><a href="javascriptLaunch.html">launch JalviewLite from a javascript button</a></li>
-               </ul>
                <h3>Notes</h3>
                <ul>
                <li>Unfortunately Javascript - Java communication is not possible
@@ -415,7 +408,7 @@ public static boolean debug
 
 <div id ="footer">
 <div id="innerFooter">
-<div id="copyright"><p>Copyright all rights reserved 2012</p></div>
+<div id="copyright"><p>Published under <a href="http://creativecommons.org/licenses/by-sa/3.0/">CC-SA 3.0</a></p></div>
 <div id="cite">
 <p>
 If you use Jalview in your work, please cite this publication:
@@ -424,10 +417,22 @@ If you use Jalview in your work, please cite this publication:
 <p>
 Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M. and Barton, G. J. (2009)
 "Jalview Version 2 - a multiple sequence alignment editor and analysis workbench"
-Bioinformatics 25 (9) 1189-1191 doi: 10.1093/bioinformatics/btp033
+Bioinformatics 25 (9) 1189-1191 <a href="http://dx.doi.org/10.1093/bioinformatics/btp033">doi: 10.1093/bioinformatics/btp033</a>
 </p>
 </div>
 </div>
 </div>
-</body>
+
+<script type="text/javascript">
+    var gaJsHost = (("https:" == document.location.protocol) ?
+ "https://ssl." : "http://www.");
+    document.write(unescape("%3Cscript src=\'" + gaJsHost +
+ "google-analytics.com/ga.js\' type=\'text/javascript\'%3E%3C/script%3E"));
+</script>
+<script type="text/javascript">
+try{
+    var pageTracker = _gat._getTracker("'UA-9060947-1'");
+    pageTracker._trackPageview();
+} catch(err) {}
+</script></body>
 </html>