clean up mistake in the test file allhits.ann

[jalview.git] / examples / testdata / phyre2results / 56da5616b4559c93 / allhits.ann

diff --git a/examples/testdata/phyre2results/56da5616b4559c93/allhits.ann b/examples/testdata/phyre2results/56da5616b4559c93/allhits.ann
index 4912c65..2fc6ceb 100644 (file)
--- a/examples/testdata/phyre2results/56da5616b4559c93/allhits.ann
+++ b/examples/testdata/phyre2results/56da5616b4559c93/allhits.ann
@@ -1,22 +1,23 @@
 JALVIEW_ANNOTATION
 HIDE_INSERTIONS
-STRUCTMODEL    FER_CAPAN_1-144 c4n58A_ c4n58A_.1.pdb   c4n58A_.1.fasta 1       54      48      143     <b>PDB Header: </b>Hyrolase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Pectocin m2<br> <b>PDB Title: </b>Crystal structure of pectocin m2 at 1.86 amgtroms
-STRUCTMODEL    FER_CAPAN_1-144 d1a70a_ d1a70a_.2.pdb   d1a70a_.2.fasta 1       71      48      144     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1offa_ d1offa_.3.pdb   d1offa_.3.fasta 1       73      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1frra_ d1frra_.4.pdb   d1frra_.4.fasta 0.999   62      49      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1pfda_ d1pfda_.5.pdb   d1pfda_.5.fasta 0.999   70      48      143     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1frda_ d1frda_.6.pdb   d1frda_.6.fasta 0.999   50      48      143     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1fxia_ d1fxia_.7.pdb   d1fxia_.7.fasta 0.999   62      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1gaqb_ d1gaqb_.8.pdb   d1gaqb_.8.fasta 0.999   71      48      144     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1iuea_ d1iuea_.9.pdb   d1iuea_.9.fasta 0.999   48      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1awda_ d1awda_.10.pdb  d1awda_.10.fasta        0.999   68      50      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1wria_ d1wria_.11.pdb  d1wria_.11.fasta        0.999   59      49      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d1czpa_ d1czpa_.12.pdb  d1czpa_.12.fasta        0.999   64      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d2cjoa_ d2cjoa_.13.pdb  d2cjoa_.13.fasta        0.999   63      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 d4fxca_ d4fxca_.14.pdb  d4fxca_.14.fasta        0.999   64      48      142     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
-STRUCTMODEL    FER_CAPAN_1-144 c4itkA_ c4itkA_.15.pdb  c4itkA_.15.fasta        0.999   57      50      142     <b>PDB Header: </b>Electron transport<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Apoferredoxin <br><b>PDB Title: </b>The structure of c.reinhardtii ferredoxin 2
-STRUCTMODEL    FER_CAPAN_1-144 c1krhA_ c1krhA_.16.pdb  c1krhA_.16.fasta        0.999   25      48      142     <b>PDB Header: </b>Oxidoreductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Benzoate 1,2-deoxygenase reductase <br> <b>PDB Title: </b>X-ray structure of benzoate deoxygenate reductase
-STRUCTMODEL    FER_CAPAN_1-144 d1krha3 d1krha3.17.pdb  d1krha3.17.fasta        0.999   24      48      143     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin domains from multi domain proteins
-STRUCTMODEL    FER_CAPAN_1-144 d1jq4a_ d1jq4a_.18.pdb  d1jq4a_.18.fasta        0.999   29      47      138     <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin domains from multi domain proteins
-STRUCTMODEL    FER_CAPAN_1-144 c4wqmA_ c4wqmA_.19.pdb  c4wqmA_.19.fasta        0.999   28      49      144     <b>PDB header: </b>Oxidoreductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Toluene-4-monooxygenase electron transfer component<br><b>PDB Title: </b>Structure of the toluene 4-monooxygenase nah oxidoreductase t4mof,2 k270s k271s variant
-STRUCTMODEL    FER_CAPAN_1-144 c2piaA_ c2piaA_.20.pdb  c2piaA_.20.fasta        0.999   22      1       136     <b>PDB header: </b>Reductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Phthalate deoxygenase reductase<br><b>PDB Title: </b>Phthalate deoxygenate reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s]
\ No newline at end of file
+HEADER_STRUCT_MODEL    QUERY_SEQ       TEMPLATE_SEQ    MODEL_FILE      MAPPING_FILE    Confidence      % I.D   Aligned Range   Other Information
+STRUCTMODEL    FER_CAPAN_1-144 c4n58A_ c4n58A_.1.pdb   c4n58A_.1.fasta 1       54      48-143  <b>PDB Header: </b>Hyrolase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Pectocin m2<br> <b>PDB Title: </b>Crystal structure of pectocin m2 at 1.86 amgtroms
+STRUCTMODEL    FER_CAPAN_1-144 d1a70a_ d1a70a_.2.pdb   d1a70a_.2.fasta 1       71      48-144  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1offa_ d1offa_.3.pdb   d1offa_.3.fasta 1       73      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1frra_ d1frra_.4.pdb   d1frra_.4.fasta 0.999   62      49-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1pfda_ d1pfda_.5.pdb   d1pfda_.5.fasta 0.999   70      48-143  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1frda_ d1frda_.6.pdb   d1frda_.6.fasta 0.999   50      48-143  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related      
+STRUCTMODEL    FER_CAPAN_1-144 d1fxia_ d1fxia_.7.pdb   d1fxia_.7.fasta 0.999   62      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1gaqb_ d1gaqb_.8.pdb   d1gaqb_.8.fasta 0.999   71      48-144  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1iuea_ d1iuea_.9.pdb   d1iuea_.9.fasta 0.999   48      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1awda_ d1awda_.10.pdb  d1awda_.10.fasta        0.999   68      50-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1wria_ d1wria_.11.pdb  d1wria_.11.fasta        0.999   59      49-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d1czpa_ d1czpa_.12.pdb  d1czpa_.12.fasta        0.999   64      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d2cjoa_ d2cjoa_.13.pdb  d2cjoa_.13.fasta        0.999   63      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 d4fxca_ d4fxca_.14.pdb  d4fxca_.14.fasta        0.999   64      48-142  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin-related
+STRUCTMODEL    FER_CAPAN_1-144 c4itkA_ c4itkA_.15.pdb  c4itkA_.15.fasta        0.999   57      50-142  <b>PDB Header: </b>Electron transport<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Apoferredoxin <br><b>PDB Title: </b>The structure of c.reinhardtii ferredoxin 2
+STRUCTMODEL    FER_CAPAN_1-144 c1krhA_ c1krhA_.16.pdb  c1krhA_.16.fasta        0.999   25      48-142  <b>PDB Header: </b>Oxidoreductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Benzoate 1,2-deoxygenase reductase <br> <b>PDB Title: </b>X-ray structure of benzoate deoxygenate reductase
+STRUCTMODEL    FER_CAPAN_1-144 d1krha3 d1krha3.17.pdb  d1krha3.17.fasta        0.999   24      48-143  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin domains from multi domain proteins
+STRUCTMODEL    FER_CAPAN_1-144 d1jq4a_ d1jq4a_.18.pdb  d1jq4a_.18.fasta        0.999   29      47-138  <b>Fold: </b>Beta-Grasp (ubiquitin-like)<br><b>Superfamily: </b>2Fe-2S ferredoxin-like<br><b>Family: </b>2Fe-2S ferredoxin domains from multi domain proteins
+STRUCTMODEL    FER_CAPAN_1-144 c4wqmA_ c4wqmA_.19.pdb  c4wqmA_.19.fasta        0.999   28      49-144  <b>PDB header: </b>Oxidoreductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Toluene-4-monooxygenase electron transfer component<br><b>PDB Title: </b>Structure of the toluene 4-monooxygenase nah oxidoreductase t4mof,2 k270s k271s variant
+STRUCTMODEL    FER_CAPAN_1-144 c2piaA_ c2piaA_.20.pdb  c2piaA_.20.fasta        0.999   22      1-136   <b>PDB header: </b>Reductase<br><b>Chain: </b>A<br><b>PDB Molecule: </b>Phthalate deoxygenase reductase<br><b>PDB Title: </b>Phthalate deoxygenate reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s]