phylogram: display ?
rollover: display yes
+color_according_to_sequence: display no
color_according_to_species: display no
color_according_to_annotation: display no
show_node_names: display yes
display_color: background 0x000000
display_color: background_gradient_bottom 0x0000FF
display_color: sequence 0xE6E6E6
-display_color: taxonomy 0xFFDCDC
+display_color: taxonomy 0xB4B4B4
display_color: confidence 0x38B0FF
display_color: branch_length 0x8C8C8C
display_color: branch 0xFFFFFF
display_color: node_box 0xFFFFFF
-display_color: collapsed 0xFFFF00
+display_color: collapsed 0xFFFFFF
display_color: matching_a 0x00FF00
display_color: matching_b 0xFF0000
display_color: matching_a_and_b 0xFFFF00
+# Sequence colors
+# ---------------
+# Format: species_color: sequencename hexcolor
+sequence_color: Tubulin-alpha 0xEE0000
+sequence_color: Tubulin-beta 0x00EE00
+
+
# Species colors
# --------------
# Format: species_color: speciesname hexcolor
species_color: Eukaryota 0xFF0000
species_color: eukaryotes 0xFF0000
+
+
# Domain colors
# -------------
-
domain_color: Cofilin_ADF 0xFC0FC0
domain_color: TIR 0x900000
domain_color: NACHT 0x202020
domain_color: NB-ARC 0x500050
domain_color: WD40 0x888888
domain_color: RVT_1 0x999900
-
domain_color: CBM_48 0xFF0000
domain_color: Alpha-amylase 0x0000FF
domain_color: Alpha-amylase_C 0x0080FF
-
domain_color: CBM_48 0xFF0000
domain_color: Alpha-amylase 0x0000FF
domain_color: Alpha-amylase_C 0x0080FF
-
domain_color: GDE_N 0x009000
domain_color: GDE_C 0x00FF00
domain_color: hGDE_N 0x990099
domain_color: hDGE_amylase 0x0000EE
+
# Annotation colors
# -----------------
-
annotation_color: dehydrogenase 0x0000FF
annotation_color: kinase 0xFF00FF
annotation_color: protease 0x009900