# Possible values: solid
# gradient
# none
-# To determine what data field to return by clicking on "return external descendents data":
-# 'ext_descendents_data_to_return'
+#
+# To determine what data field to return by clicking on "Return ...": 'ext_descendents_data_to_return'
# Possible values: node_name
# sequence_name
# sequence_acc
# sequence_mol_seq
# sequence_symbol
+# taxonomy_scientific_name
+# taxonomy_code
+# user_selected
+# To determine where to return data by clicking on "Return ...": 'ext_descendents_data_to_return_on'
+# Possible values: window
+# console
+# To override label for menu item to return data of external nodes (default ""Return ..."): 'label_for_get_ext_descendents_data'
+# Example: 'label_for_get_ext_descendents_data: Get_Node_Data'
+#
# Taxonomy colorization of nodes (shapes) instead of labels: 'taxonomy_colorize_node_shapes': values: 'yes'/'no'
# Do/not color labels same as branch length values: 'color_labels_same_as_branch_length_values': values: 'yes'/'no'
# Do/not show domain labels: 'show_domain_labels': values: 'yes'/'no'
internal_labels_are_confidence_values: no
replace_underscores_in_nh_parsing: no
extract_taxonomy_codes_in_nh_parsing: yes
-ext_descendents_data_to_return: sequence_mol_seq
+ext_descendents_data_to_return_on: window
+ext_descendents_data_to_return: user_selected
+#label_for_get_ext_descendents_data: Get_Node_Data
+
# phyloXML parsing
show_vector_data: display no
+
# Combo-box Display Selection
# ---------------------------
# Format: 'name: display/nodisplay'
click_to: delete display
click_to: add_new_node display
click_to: edit_node_data display
+click_to: select_nodes display
click_to: get_ext_descendents_data display
# Default click-to option (any of the above if set to "display")
gui_button_border_color: 0x000000
+
# Domain Structure Display Colors
# -------------------------------
domain_structure_base_color: 0x202020
domain_color: NB-ARC 0x500050
domain_color: WD40 0x888888
domain_color: RVT_1 0x999900
-domain_color: NOPS 0x505000
-domain_color: RRM_1 0x004400
-domain_color: fn3 0xFFCC00
-domain_color: Ank 0xCC33FF
-domain_color: Pkinase 0x339900
-domain_color: Pkinase_Tyr 0x336600
-domain_color: ig 0x660066
-domain_color: zf-C3HC4 0x6699FF
-domain_color: zf-CCHC 0x6699EE
-domain_color: zf-C2H2 0x6699CC
-domain_color: zf-B_box 0x6699DD
-domain_color: PDZ 0x66FFCC
-domain_color: SH3_2 0x996600
-domain_color: MIRO 0xCCFF00
-domain_color: Myb_DNA-binding 0xDDDDDD
-domain_color: NHL 0x336666
-domain_color: PKD_channel 0x336666
-domain_color: Ion_trans 0x996666
-domain_color: CAP_GLY 0xCC9900
-domain_color: LRR_1 0xFFFF99
-domain_color: LRR_2 0xFFFF66
-domain_color: LRR_3 0xFFFF33
-domain_color: LRR_adjacent 0xFFFF00
-domain_color: LRRCT 0xFFCC99
-domain_color: LRRNT 0xFFCC66
-domain_color: LRRNT_2 0xFFCC33
-domain_color: Ank 0x990099
-domain_color: Sushi 0x004400
-domain_color: ZU5 0xFF9999
-domain_color: V-set 0x3399FF
-domain_color: TPR_1 0xFF1493
-domain_color: TPR_2 0xFF69B4
-domain_color: TPR_3 0xCD6090
-domain_color: TPR_4 0xFF6A6A
-domain_color: TPR_MLP1_2 0x33FF00
-domain_color: Collagen 0xFF7F00
-domain_color: MIF 0xADD8E6
+
# Annotation colors