-# Last updated: 140319
+# Last updated: 140709
#
# Ophistokonta::Animals (mammals)
BOVIN /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/BOVIN.fasta
ENTDS /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ENTDS.fasta
ENTHI /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ENTHI.fasta
POLPA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/POLPA.fasta
-# Corticata::Archaeplastida::Viridaeplantae::Streptophyta
+# Viridaeplantae::Streptophyta
AMBTC /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/AMBTC.fasta
AQUCA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/AQUCA.fasta
ARALY /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ARALY.fasta
SOYBN /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/SOYBN.fasta
THEHA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/THEHA.fasta
VITVI /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/VITVI.fasta
-# Corticata::Archaeplastida::Viridaeplantae::Chlorophyta
+# Viridaeplantae::Chlorophyta
ASCXX /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ASCXX.fasta
CHLRE /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/CHLRE.fasta
CHLVA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/CHLVA.fasta
OSTLU /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/OSTLU.fasta
OSTTA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/OSTTA.fasta
VOLCA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/VOLCA.fasta
-# Corticata::Archaeplastida::Rhodophyta
+# Rhodophyta
CYAME /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/CYAME.fasta
-# Corticata::Chromalveolates
+# Glaucophyta
+CYAPA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/CYAPA.fasta
+# Chromalveolates
AKEXX /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/AKEXX.fasta
ALIXX /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ALIXX.fasta
AURAN /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/AURAN.fasta
THEAN /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/THEAN.fasta
THEPA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/THEPA.fasta
TOXGO /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/TOXGO.fasta
-# Cabozoa::Excavata
+# Excavata
BODSA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/BODSA.fasta
GIAIC /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/GIAIC.fasta
LEIBR /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/LEIBR.fasta
NAEGR /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/NAEGR.fasta
TRIVA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/TRIVA.fasta
TRYB2 /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/TRYB2.fasta
-# Cabozoa::Rhizaria
+# Rhizaria
BIGNA /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/BIGNA.fasta
+RETFI /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/RETFI.fasta
# Archaea
AERPE /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/AERPE.fasta
ARCFU /home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/ARCFU.fasta