+# Last updated: 140709
+#
# Ophistokonta::Animals (mammals)
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BOVIN.hmmscan BOVIN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CANFA.hmmscan CANFA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ORNAN.hmmscan ORNAN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/OTOGA.hmmscan OTOGA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PANTR.hmmscan PANTR
-/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PIG.hmmscan PIG
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PIG.hmmscan PIG
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RABIT.hmmscan RABIT
-/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RAT.hmmscan RAT
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RAT.hmmscan RAT
# Ophistokonta::Animals (except mammals)
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ACRDI.hmmscan ACRDI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ACREC.hmmscan ACREC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ACYPI.hmmscan ACYPI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AEDAE.hmmscan AEDAE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AMPQE.hmmscan AMPQE
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ANAPL.hmmscan ANAPL
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ANOCA.hmmscan ANOCA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ANOGA.hmmscan ANOGA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/APIME.hmmscan APIME
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ASTMX.hmmscan ASTMX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ATTCE.hmmscan ATTCE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BOMMO.hmmscan BOMMO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BRAFL.hmmscan BRAFL
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CAEEL.hmmscan CAEEL
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CAEJA.hmmscan CAEJA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CAERE.hmmscan CAERE
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CALMI.hmmscan CALMI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CAMFO.hmmscan CAMFO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CHICK.hmmscan CHICK
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CIOIN.hmmscan CIOIN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CIOSA.hmmscan CIOSA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CLOSI.hmmscan CLOSI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CRAGI.hmmscan CRAGI
-/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CTEXX.hmmscan CTEXX
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CAPTE.hmmscan CAPTE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CULPI.hmmscan CULPI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/DANPL.hmmscan DANPL
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/DANRE.hmmscan DANRE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/DROWI.hmmscan DROWI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/DROYA.hmmscan DROYA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ECHMU.hmmscan ECHMU
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/FICAL.hmmscan FICAL
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/GADMO.hmmscan GADMO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/GASAC.hmmscan GASAC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/HELRO.hmmscan HELRO
-/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/HMAXX.hmmscan HMAXX
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/HYDVU.hmmscan HYDVU
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/HYMMI.hmmscan HYMMI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/IXOSC.hmmscan IXOSC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/LATCH.hmmscan LATCH
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/LEPOC.hmmscan LEPOC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/LOTGI.hmmscan LOTGI
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/LYTVA.hmmscan LYTVA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MELGA.hmmscan MELGA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MNELE.hmmscan MNELE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/NASVI.hmmscan NASVI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/NEMVE.hmmscan NEMVE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/OIKDI.hmmscan OIKDI
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/OPHHA.hmmscan OPHHA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ORENI.hmmscan ORENI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ORYLA.hmmscan ORYLA
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PATMI.hmmscan PATMI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PEDHC.hmmscan PEDHC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PELSI.hmmscan PELSI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PETMA.hmmscan PETMA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MAGGR.hmmscan MAGGR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MALGO.hmmscan MALGO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MELLP.hmmscan MELLP
-/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MPSXX.hmmscan MPSXX
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/SPHMS.hmmscan SPHMS
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MUCCI.hmmscan MUCCI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MVNXX.hmmscan MVNXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/MYCGM.hmmscan MYCGM
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PPLXX.hmmscan PPLXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PUCGR.hmmscan PUCGR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PYRTR.hmmscan PYRTR
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RHIID.hmmscan RHIID
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RHIO9.hmmscan RHIO9
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RHIOR.hmmscan RHIOR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RHOGR.hmmscan RHOGR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/SCHJY.hmmscan SCHJY
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ENTDS.hmmscan ENTDS
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ENTHI.hmmscan ENTHI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/POLPA.hmmscan POLPA
-# Corticata::Archaeplastida::Viridaeplantae::Streptophyta
+# Viridaeplantae::Streptophyta
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AMBTC.hmmscan AMBTC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AQUCA.hmmscan AQUCA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ARALY.hmmscan ARALY
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ARATH.hmmscan ARATH
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/SOYBN.hmmscan SOYBN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/THEHA.hmmscan THEHA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/VITVI.hmmscan VITVI
-# Corticata::Archaeplastida::Viridaeplantae::Chlorophyta
+# Viridaeplantae::Chlorophyta
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ASCXX.hmmscan ASCXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CHLRE.hmmscan CHLRE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CHLVA.hmmscan CHLVA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/OSTLU.hmmscan OSTLU
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/OSTTA.hmmscan OSTTA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/VOLCA.hmmscan VOLCA
-# Corticata::Archaeplastida::Rhodophyta
+# Rhodophyta
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CYAME.hmmscan CYAME
-# Corticata::Chromalveolates
+# Glaucophyta
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CYAPA.hmmscan CYAPA
+# Chromalveolates
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AKEXX.hmmscan AKEXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ALIXX.hmmscan ALIXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AURAN.hmmscan AURAN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BLAHO.hmmscan BLAHO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CRYHO.hmmscan CRYHO
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/CRYPI.hmmscan CRYPI
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/EIMAC.hmmscan EIMAC
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ICHMG.hmmscan ICHMG
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/PERM5.hmmscan PERM5
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ECTSI.hmmscan ECTSI
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/EMIHU.hmmscan EMIHU
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/FCYXX.hmmscan FCYXX
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/THEAN.hmmscan THEAN
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/THEPA.hmmscan THEPA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/TOXGO.hmmscan TOXGO
-# Cabozoa::Excavata
+# Excavata
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BODSA.hmmscan BODSA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/GIAIC.hmmscan GIAIC
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/LEIBR.hmmscan LEIBR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/NAEGR.hmmscan NAEGR
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/TRIVA.hmmscan TRIVA
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/TRYB2.hmmscan TRYB2
-# Cabozoa::Rhizaria
+# Rhizaria
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/BIGNA.hmmscan BIGNA
+/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/RETFI.hmmscan RETFI
# Archaea
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/AERPE.hmmscan AERPE
/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/ARCFU.hmmscan ARCFU