inprogress

[jalview.git] / forester / java / src / org / forester / analysis / TaxonomyDataManager.java

diff --git a/forester/java/src/org/forester/analysis/TaxonomyDataManager.java b/forester/java/src/org/forester/analysis/TaxonomyDataManager.java
index 79ab713..31de4f9 100644 (file)
--- a/forester/java/src/org/forester/analysis/TaxonomyDataManager.java
+++ b/forester/java/src/org/forester/analysis/TaxonomyDataManager.java
@@ -184,16 +184,13 @@ public final class TaxonomyDataManager extends RunnableProcess {
     }
 
     private final static List<UniProtTaxonomy> getTaxonomiesFromScientificName( final String query ) throws IOException {
-        if ( query.equalsIgnoreCase( UniProtTaxonomy.BACTERIA ) ||
-                query.equalsIgnoreCase( UniProtTaxonomy.ARCHAEA ) ||
-                query.equalsIgnoreCase( UniProtTaxonomy.VIRUSES ) ||
-                query.equalsIgnoreCase( UniProtTaxonomy.EUKARYOTA ) 
-                ) {
+        if ( query.equalsIgnoreCase( UniProtTaxonomy.BACTERIA ) || query.equalsIgnoreCase( UniProtTaxonomy.ARCHAEA )
+                || query.equalsIgnoreCase( UniProtTaxonomy.VIRUSES )
+                || query.equalsIgnoreCase( UniProtTaxonomy.EUKARYOTA ) || query.equalsIgnoreCase( UniProtTaxonomy.X ) ) {
             final List<UniProtTaxonomy> l = new ArrayList<UniProtTaxonomy>();
             l.add( UniProtTaxonomy.createSpecialFromScientificName( query ) );
             return l;
         }
-        
         return SequenceDbWsTools.getTaxonomiesFromScientificNameStrict( query, MAX_TAXONOMIES_TO_RETURN );
     }