gsdi work

[jalview.git] / forester / java / src / org / forester / application / count_support.java

diff --git a/forester/java/src/org/forester/application/count_support.java b/forester/java/src/org/forester/application/count_support.java
index e094f69..96a7596 100644 (file)
--- a/forester/java/src/org/forester/application/count_support.java
+++ b/forester/java/src/org/forester/application/count_support.java
@@ -32,6 +32,7 @@ import java.util.Arrays;
 import java.util.List;
 
 import org.forester.io.parsers.PhylogenyParser;
+import org.forester.io.parsers.util.ParserUtils;
 import org.forester.io.writers.PhylogenyWriter;
 import org.forester.phylogeny.Phylogeny;
 import org.forester.phylogeny.PhylogenyMethods;
@@ -49,11 +50,13 @@ public class count_support {
     final static private String  PRG_NAME                = "count_support";
     final static private String  PRG_VERSION             = "1.0";
     final static private String  PRG_DATE                = "2008.03.04";
+    final static private String E_MAIL        = "phylosoft@gmail.com";
+    final static private String WWW           = "www.phylosoft.org/forester/";
     private final static boolean WRITE_EVALUATORS_AS_NHX = false;
 
     public static void main( final String args[] ) {
-        ForesterUtil
-                .printProgramInformation( count_support.PRG_NAME, count_support.PRG_VERSION, count_support.PRG_DATE );
+         ForesterUtil.printProgramInformation( PRG_NAME, null, PRG_VERSION, PRG_DATE, E_MAIL, WWW, ForesterUtil.getForesterLibraryInformation() );
+        
         if ( ( args.length < 3 ) || ( args.length > 7 ) ) {
             System.out.println();
             System.out.println( count_support.PRG_NAME + ": wrong number of arguments" );
@@ -104,7 +107,7 @@ public class count_support {
         Phylogeny[] ev = null;
         try {
             final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
-            final PhylogenyParser pp = ForesterUtil.createParserDependingOnFileType( phylogeny_infile, true );
+            final PhylogenyParser pp = ParserUtils.createParserDependingOnFileType( phylogeny_infile, true );
             p = factory.create( phylogeny_infile, pp )[ 0 ];
         }
         catch ( final Exception e ) {
@@ -113,7 +116,7 @@ public class count_support {
         }
         try {
             final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
-            final PhylogenyParser pp = ForesterUtil.createParserDependingOnFileType( evaluators_infile, true );
+            final PhylogenyParser pp = ParserUtils.createParserDependingOnFileType( evaluators_infile, true );
             ev = factory.create( evaluators_infile, pp );
         }
         catch ( final Exception e ) {