try {
final PhylogenyWriter writer = new PhylogenyWriter();
if ( base_algorithm == ALGORITHM.GSDIR ) {
- writer.toPhyloXML( out_file,
- ( ( GSDIR ) gsdii ).getMinDuplicationsSumGeneTrees(),
- 0,
- ForesterUtil.LINE_SEPARATOR );
+ writer.toPhyloXML( out_file, ( ( GSDIR ) gsdii ).getMinDuplicationsSumGeneTree(), 0 );
}
else {
writer.toPhyloXML( out_file, gene_tree, 0 );