minor change: add one more decimal place to table output
[jalview.git] / forester / java / src / org / forester / application / gsdi.java
index 711b1e6..7e2d514 100644 (file)
@@ -180,7 +180,7 @@ public final class gsdi {
         }
         try {
             final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
-            gene_tree = factory.create( gene_tree_file, new PhyloXmlParser() )[ 0 ];
+            gene_tree = factory.create( gene_tree_file, PhyloXmlParser.createPhyloXmlParserXsdValidating() )[ 0 ];
         }
         catch ( final IOException e ) {
             fatalError( "error",
@@ -245,12 +245,12 @@ public final class gsdi {
         final long start_time = new Date().getTime();
         try {
             if ( base_algorithm == ALGORITHM.GSDI ) {
-                System.out.println( "Algorithm       : GSDI" );
-                log_writer.println( "Algorithm       : GSDI" );
+                System.out.println( "Algorithm                                : GSDI" );
+                log_writer.println( "Algorithm                                : GSDI" );
             }
             else if ( base_algorithm == ALGORITHM.GSDIR ) {
-                System.out.println( "Algorithm       : GSDIR" );
-                log_writer.println( "Algorithm       : GSDIR" );
+                System.out.println( "Algorithm                                : GSDIR" );
+                log_writer.println( "Algorithm                                : GSDIR" );
             }
             System.out.println( "Use most parsimonous duplication model   : " + most_parsimonous_duplication_model );
             System.out.println( "Allow stripping of gene tree nodes       : " + allow_stripping_of_gene_tree );