+ "ms" );
System.out.println( "Mapping based on : " + gsdii.getTaxCompBase() );
log_writer.println( "Mapping based on : " + gsdii.getTaxCompBase() );
- if ( ( base_algorithm == ALGORITHM.GSDIR ) ) {
- final GSDIR gsdir = ( GSDIR ) gsdii;
- System.out.println( "Duplications sum statistics : " + gsdir.getMinDuplicationsSum() );
- log_writer.println( "Duplications sum statistics : " + gsdir.getMinDuplicationsSum() );
- }
try {
final PhylogenyWriter writer = new PhylogenyWriter();
if ( base_algorithm == ALGORITHM.GSDIR ) {